Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.39□□□□□ -1.39
RNF144AP50876 Y_RNA.552-201ENST00000384665 112 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RNF144AP50876 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 OR6C66P-201ENST00000414917 930 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AC017078.1-201ENST00000416146 368 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF144AP50876 AC005019.1-201ENST00000436455 431 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 HMGB1P12-201ENST00000438594 598 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF144AP50876 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF144AP50876 RPL21P23-201ENST00000446654 460 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF144AP50876 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 AC002456.2-201ENST00000509356 380 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AC021146.1-201ENST00000511202 716 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 FTH1P9-201ENST00000513251 355 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
RNF144AP50876 RNU6-488P-201ENST00000515918 99 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 RNU6-1143P-201ENST00000516125 104 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AC105031.1-201ENST00000518550 476 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AP000827.1-201ENST00000527814 258 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AP005435.4-201ENST00000529514 284 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 FXNP1-201ENST00000555153 337 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 RPL21P12-201ENST00000559810 515 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF144AP50876 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF144AP50876 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF144AP50876 AP005212.3-201ENST00000619964 528 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 AC008626.2-201ENST00000624425 248 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF144AP50876 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 API5P2-201ENST00000397055 1498 ntBASIC6.39□□□□□ -1.39
RNF144AP50876 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RNF144AP50876 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF144AP50876 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF144AP50876 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RNF144AP50876 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RNF144AP50876 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF144AP50876 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF144AP50876 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF144AP50876 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
RNF144AP50876 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF144AP50876 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF144AP50876 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF144AP50876 Y_RNA.153-201ENST00000363615 91 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 SNORD113-7-201ENST00000363762 77 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 RNU6-601P-201ENST00000384540 107 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RNF144AP50876 Y_RNA.646-201ENST00000410980 101 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 RPSAP60-201ENST00000415403 880 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF144AP50876 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF144AP50876 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF144AP50876 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF144AP50876 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF144AP50876 RPS20P21-201ENST00000466859 343 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF144AP50876 AC022415.1-202ENST00000486612 523 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF144AP50876 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF144AP50876 RNU6-1213P-201ENST00000517075 94 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 EEF1B2P2-201ENST00000519625 676 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 OR5M6P-201ENST00000530227 937 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF144AP50876 SSU72P6-201ENST00000532644 488 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 AC128657.1-201ENST00000549459 145 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF144AP50876 AC007375.1-201ENST00000554513 578 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 AL118558.2-201ENST00000556294 238 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 CTSLP2-201ENST00000580501 394 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 MIR4424-201ENST00000585257 86 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 AC008687.2-201ENST00000597865 520 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 AL513327.3-201ENST00000602618 469 ntBASIC6.38□□□□□ -1.39
RNF144AP50876 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF144AP50876 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.38□□□□□ -1.39
RNF144AP50876 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF144AP50876 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF144AP50876 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF144AP50876 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
RNF144AP50876 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF144AP50876 TCP11X1-202ENST00000622971 1372 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms