Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MAPRE1P3-201ENST00000435438 796 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA9P31269 NOTCH2P1-201ENST00000443481 624 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA9P31269 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 RPS26P28-201ENST00000470806 348 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 GAPDHP36-201ENST00000480688 918 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 PRELID3BP7-201ENST00000503606 469 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HOXA9P31269 HAUS1P1-201ENST00000505275 832 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA9P31269 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA9P31269 CYCSP30-201ENST00000546447 172 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA9P31269 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA9P31269 AC027176.2-201ENST00000559166 746 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA9P31269 AC110743.1-201ENST00000584870 478 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXA9P31269 AC114878.2-201ENST00000604863 1251 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 MIR7702-201ENST00000621931 59 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HOXA9P31269 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA9P31269 AL592437.2-201ENST00000421655 2434 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA9P31269 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 AC007390.2-201ENST00000606229 3803 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA9P31269 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA9P31269 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 AC068254.2-201ENST00000623938 3577 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA9P31269 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA9P31269 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA9P31269 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
HOXA9P31269 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA9P31269 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA9P31269 RPL23AP48-201ENST00000406913 488 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA9P31269 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA9P31269 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA9P31269 RPL37P1-201ENST00000432310 284 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 ELOCP10-201ENST00000440624 327 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 PSMC1P13-201ENST00000458195 985 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 OR9M1P-201ENST00000459641 921 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 RPS20P21-201ENST00000466859 343 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA9P31269 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA9P31269 AC008694.2-201ENST00000517591 306 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA9P31269 AC008676.3-201ENST00000521237 435 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 DEFB109D-201ENST00000529497 240 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXA9P31269 AL121834.1-201ENST00000572284 509 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 AC025627.2-201ENST00000576220 160 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 FAM106CP-201ENST00000582212 507 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA9P31269 ELOCP34-201ENST00000604436 327 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 SNORA51-201ENST00000606420 132 ntBASIC4.25□□□□□ -1.73
HOXA9P31269 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA9P31269 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA9P31269 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA9P31269 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA9P31269 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA9P31269 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA9P31269 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HOXA9P31269 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA9P31269 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA9P31269 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HOXA9P31269 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA9P31269 AC012020.1-201ENST00000624541 1728 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA9P31269 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA9P31269 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 FAM91A3P-201ENST00000456826 2544 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 RNA5SP52-201ENST00000362448 134 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 SNORA71.3-201ENST00000362582 128 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 AL590704.1-201ENST00000402856 794 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 VN1R8P-201ENST00000407739 893 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 AL603766.1-201ENST00000407763 664 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA9P31269 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 DPY19L1P2-201ENST00000426647 915 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 DYNLL1P7-201ENST00000429273 258 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 AL358472.1-201ENST00000431295 329 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 RPL23AP89-201ENST00000439324 255 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 NDUFS5P3-201ENST00000450668 321 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 FGF7P3-201ENST00000454645 303 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms