Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.7□□□□□ -1.82
CD40LGP29965 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40LGP29965 AC078817.1-201ENST00000492623 435 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 RN7SL812P-201ENST00000493791 279 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 RPL30P11-201ENST00000495304 339 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 MTATP6P22-201ENST00000507369 598 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40LGP29965 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40LGP29965 MTCO1P30-201ENST00000515244 580 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.7□□□□□ -1.82
CD40LGP29965 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.7□□□□□ -1.82
CD40LGP29965 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.7□□□□□ -1.82
CD40LGP29965 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CD40LGP29965 AL109766.1-201ENST00000555080 552 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 AC099489.2-201ENST00000574976 260 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40LGP29965 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40LGP29965 AP003117.1-201ENST00000602771 554 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40LGP29965 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40LGP29965 MIR6891-201ENST00000618788 93 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 AC007546.1-201ENST00000619452 559 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40LGP29965 AP005264.7-201ENST00000625003 745 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CD40LGP29965 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CD40LGP29965 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CD40LGP29965 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.7□□□□□ -1.82
CD40LGP29965 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CD40LGP29965 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.7□□□□□ -1.82
CD40LGP29965 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.69□□□□□ -1.82
CD40LGP29965 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 ERCC6-202ENST00000374127 1782 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 CR381670.1-201ENST00000624291 1693 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CD40LGP29965 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 ATP5F1P4-201ENST00000397288 746 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 RN7SKP100-201ENST00000411258 284 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 AC004022.2-201ENST00000413824 193 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 AC016769.2-201ENST00000414815 475 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 BTF3P9-201ENST00000418784 283 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 AC007394.1-201ENST00000421941 531 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 AC017083.1-201ENST00000428093 483 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 NPM1P34-201ENST00000428821 893 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 HMGB3P5-201ENST00000428894 612 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 USP9YP9-201ENST00000429406 715 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 VN1R25P-201ENST00000443385 738 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.69□□□□□ -1.82
CD40LGP29965 VN1R40P-201ENST00000455196 941 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 RPL7P22-201ENST00000466005 733 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 AC011005.3-201ENST00000491624 395 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 RPL5P23-201ENST00000496040 868 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 FTH1P24-201ENST00000503502 462 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.69□□□□□ -1.82
CD40LGP29965 AC034244.2-201ENST00000514668 858 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CD40LGP29965 SEC11B-201ENST00000518383 499 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.69□□□□□ -1.82
CD40LGP29965 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.69□□□□□ -1.82
CD40LGP29965 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.69□□□□□ -1.82
CD40LGP29965 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.69□□□□□ -1.82
CD40LGP29965 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.69□□□□□ -1.82
CD40LGP29965 AC007448.1-201ENST00000582714 234 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 MIR4443-201ENST00000585052 53 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.69□□□□□ -1.82
CD40LGP29965 RNA5SP108-201ENST00000605921 117 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.69□□□□□ -1.82
CD40LGP29965 MIR6853-201ENST00000619642 74 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 CR392039.4-201ENST00000624968 501 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 AC092162.3-201ENST00000624511 1624 ntBASIC3.69□□□□□ -1.82
CD40LGP29965 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CD40LGP29965 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40LGP29965 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CD40LGP29965 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CD40LGP29965 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.68□□□□□ -1.82
CD40LGP29965 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.68□□□□□ -1.82
CD40LGP29965 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CD40LGP29965 MTND2P15-201ENST00000418575 892 ntBASIC3.68□□□□□ -1.82
CD40LGP29965 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.68□□□□□ -1.82
CD40LGP29965 AL590762.4-201ENST00000425885 253 ntBASIC3.68□□□□□ -1.82
CD40LGP29965 HMGB1P32-201ENST00000425971 565 ntBASIC3.68□□□□□ -1.82
CD40LGP29965 NPM1P26-201ENST00000426339 738 ntBASIC3.68□□□□□ -1.82
CD40LGP29965 AL392003.1-201ENST00000434394 243 ntBASIC3.68□□□□□ -1.82
CD40LGP29965 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CD40LGP29965 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.68□□□□□ -1.82
CD40LGP29965 AC005154.2-201ENST00000438110 379 ntBASIC3.68□□□□□ -1.82
CD40LGP29965 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.68□□□□□ -1.82
CD40LGP29965 TPMTP4-201ENST00000450749 678 ntBASIC3.68□□□□□ -1.82
CD40LGP29965 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 242.2 ms