Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.38□□□□□ -1.87
CCL1P22362 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCL1P22362 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
CCL1P22362 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL1P22362 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL1P22362 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL1P22362 AP002001.2-201ENST00000529025 1469 ntBASIC3.37□□□□□ -1.87
CCL1P22362 RPL37P18-201ENST00000411602 243 ntBASIC3.37□□□□□ -1.87
CCL1P22362 RPL21P109-201ENST00000422213 475 ntBASIC3.37□□□□□ -1.87
CCL1P22362 DPY19L1P2-201ENST00000426647 915 ntBASIC3.37□□□□□ -1.87
CCL1P22362 AC093716.1-201ENST00000435923 377 ntBASIC3.37□□□□□ -1.87
CCL1P22362 HMGB3P21-201ENST00000452483 547 ntBASIC3.37□□□□□ -1.87
CCL1P22362 AC021205.1-201ENST00000468797 348 ntBASIC3.37□□□□□ -1.87
CCL1P22362 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCL1P22362 S100A11P1-201ENST00000477525 312 ntBASIC3.37□□□□□ -1.87
CCL1P22362 AC084198.1-201ENST00000477747 402 ntBASIC3.37□□□□□ -1.87
CCL1P22362 RN7SL459P-201ENST00000481078 302 ntBASIC3.37□□□□□ -1.87
CCL1P22362 RPS23P1-201ENST00000491662 432 ntBASIC3.37□□□□□ -1.87
CCL1P22362 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.37□□□□□ -1.87
CCL1P22362 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.37□□□□□ -1.87
CCL1P22362 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.37□□□□□ -1.87
CCL1P22362 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.37□□□□□ -1.87
CCL1P22362 RNA5SP179-201ENST00000517284 121 ntBASIC3.37□□□□□ -1.87
CCL1P22362 NARSP2-201ENST00000518524 679 ntBASIC3.37□□□□□ -1.87
CCL1P22362 NDUFA5P2-201ENST00000519723 344 ntBASIC3.37□□□□□ -1.87
CCL1P22362 AC034205.1-201ENST00000520621 638 ntBASIC3.37□□□□□ -1.87
CCL1P22362 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.37□□□□□ -1.87
CCL1P22362 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCL1P22362 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.37□□□□□ -1.87
CCL1P22362 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.37□□□□□ -1.87
CCL1P22362 AC084373.1-201ENST00000603311 235 ntBASIC3.37□□□□□ -1.87
CCL1P22362 AC091167.4-201ENST00000605079 184 ntBASIC3.37□□□□□ -1.87
CCL1P22362 AC000123.2-201ENST00000623124 461 ntBASIC3.37□□□□□ -1.87
CCL1P22362 AL356121.2-201ENST00000624715 780 ntBASIC3.37□□□□□ -1.87
CCL1P22362 AC244205.2-202ENST00000635781 342 ntBASIC3.37□□□□□ -1.87
CCL1P22362 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL1P22362 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL1P22362 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL1P22362 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
CCL1P22362 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL1P22362 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL1P22362 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CCL1P22362 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL1P22362 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 RNU1-32P-201ENST00000363937 159 ntBASIC3.36□□□□□ -1.87
CCL1P22362 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL1P22362 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.36□□□□□ -1.87
CCL1P22362 MTCYBP7-201ENST00000419540 1134 ntBASIC3.36□□□□□ -1.87
CCL1P22362 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL1P22362 AC073464.3-201ENST00000422564 712 ntBASIC3.36□□□□□ -1.87
CCL1P22362 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.36□□□□□ -1.87
CCL1P22362 TBCAP1-201ENST00000436520 327 ntBASIC3.36□□□□□ -1.87
CCL1P22362 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL1P22362 OR6C72P-201ENST00000451403 892 ntBASIC3.36□□□□□ -1.87
CCL1P22362 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL1P22362 MTCYBP14-201ENST00000457471 715 ntBASIC3.36□□□□□ -1.87
CCL1P22362 RPL21P11-201ENST00000461458 483 ntBASIC3.36□□□□□ -1.87
CCL1P22362 AC010307.1-201ENST00000467206 836 ntBASIC3.36□□□□□ -1.87
CCL1P22362 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL1P22362 SUMO2P20-201ENST00000520803 283 ntBASIC3.36□□□□□ -1.87
CCL1P22362 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL1P22362 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL1P22362 AC138701.1-201ENST00000524329 714 ntBASIC3.36□□□□□ -1.87
CCL1P22362 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.36□□□□□ -1.87
CCL1P22362 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.36□□□□□ -1.87
CCL1P22362 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.36□□□□□ -1.87
CCL1P22362 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL1P22362 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL1P22362 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL1P22362 AC104785.1-201ENST00000603220 588 ntBASIC3.36□□□□□ -1.87
CCL1P22362 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL1P22362 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL1P22362 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCL1P22362 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCL1P22362 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.36□□□□□ -1.87
CCL1P22362 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL1P22362 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCL1P22362 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCL1P22362 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL1P22362 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCL1P22362 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.35□□□□□ -1.87
CCL1P22362 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCL1P22362 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCL1P22362 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCL1P22362 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.35□□□□□ -1.87
CCL1P22362 RNA5SP443-201ENST00000363083 132 ntBASIC3.35□□□□□ -1.87
CCL1P22362 RNA5SP130-201ENST00000364431 114 ntBASIC3.35□□□□□ -1.87
CCL1P22362 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCL1P22362 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.35□□□□□ -1.87
CCL1P22362 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms