Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC012170.1-201ENST00000495139 359 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 OR52A4P-203ENST00000498233 1014 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.71□□□□□ -1.82
UBCP0CG48 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.71□□□□□ -1.82
UBCP0CG48 AC025554.1-201ENST00000505641 188 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
UBCP0CG48 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.71□□□□□ -1.82
UBCP0CG48 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.71□□□□□ -1.82
UBCP0CG48 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.71□□□□□ -1.82
UBCP0CG48 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.71□□□□□ -1.82
UBCP0CG48 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.71□□□□□ -1.82
UBCP0CG48 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.71□□□□□ -1.82
UBCP0CG48 AC063950.1-201ENST00000552036 308 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 AC084783.1-201ENST00000565846 910 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 AC141257.3-201ENST00000572906 215 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
UBCP0CG48 AC005255.1-201ENST00000593748 216 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 AL133247.2-201ENST00000603236 482 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 AC110792.4-201ENST00000609843 298 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 AC012409.3-201ENST00000611343 981 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 LINC00216-201ENST00000623548 1126 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.71□□□□□ -1.82
UBCP0CG48 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.71□□□□□ -1.82
UBCP0CG48 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UBCP0CG48 AC007342.9-201ENST00000623877 1385 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.71□□□□□ -1.82
UBCP0CG48 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.71□□□□□ -1.82
UBCP0CG48 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.82
UBCP0CG48 EIF2AP4-201ENST00000424793 1781 ntBASIC3.71□□□□□ -1.82
UBCP0CG48 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UBCP0CG48 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.7□□□□□ -1.82
UBCP0CG48 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
UBCP0CG48 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
UBCP0CG48 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
UBCP0CG48 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBCP0CG48 AC106871.1-201ENST00000568324 3102 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 RNU4-74P-201ENST00000411280 161 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 LINC01881-201ENST00000416103 412 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBCP0CG48 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.7□□□□□ -1.82
UBCP0CG48 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.7□□□□□ -1.82
UBCP0CG48 AL139095.3-201ENST00000419672 1203 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBCP0CG48 ELOCP6-201ENST00000429066 328 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC023347.2-201ENST00000433994 462 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 TPTE2P1-204ENST00000435256 593 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.7□□□□□ -1.82
UBCP0CG48 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBCP0CG48 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBCP0CG48 AC105402.2-201ENST00000438503 358 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBCP0CG48 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.7□□□□□ -1.82
UBCP0CG48 ARL2BPP10-201ENST00000446487 531 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.7□□□□□ -1.82
UBCP0CG48 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.7□□□□□ -1.82
UBCP0CG48 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.7□□□□□ -1.82
UBCP0CG48 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBCP0CG48 ELOCP12-201ENST00000458706 328 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC109458.1-201ENST00000508858 316 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC108157.1-201ENST00000510511 539 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.7□□□□□ -1.82
UBCP0CG48 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBCP0CG48 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.7□□□□□ -1.82
UBCP0CG48 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.7□□□□□ -1.82
UBCP0CG48 AL121594.4-201ENST00000556211 1196 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC027176.2-201ENST00000559166 746 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 MIR4436B2-201ENST00000581415 91 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 MIR4436B1-201ENST00000583272 91 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.7□□□□□ -1.82
UBCP0CG48 AC068790.7-201ENST00000602347 528 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC069304.3-201ENST00000603938 1084 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AL354984.3-201ENST00000604803 325 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC113403.1-201ENST00000604910 193 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 FAM25E-202ENST00000608562 189 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC064801.1-201ENST00000612025 407 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 MIR486-1-201ENST00000612171 68 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC245389.2-201ENST00000616023 576 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 RN7SL722P-201ENST00000617780 284 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 RN7SL565P-201ENST00000618246 284 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC243756.2-201ENST00000618406 463 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC242843.1-201ENST00000618702 573 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 C2orf27A-204ENST00000623058 969 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 AC004943.3-201ENST00000624116 600 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.7□□□□□ -1.82
UBCP0CG48 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.7□□□□□ -1.82
UBCP0CG48 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.7□□□□□ -1.82
UBCP0CG48 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBCP0CG48 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.7□□□□□ -1.82
UBCP0CG48 RAD17P1-201ENST00000418130 2042 ntBASIC3.7□□□□□ -1.82
UBCP0CG48 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
UBCP0CG48 AC022031.1-201ENST00000585985 2593 ntBASIC3.69□□□□□ -1.82
UBCP0CG48 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.69□□□□□ -1.82
UBCP0CG48 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
UBCP0CG48 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UBCP0CG48 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.69□□□□□ -1.82
UBCP0CG48 AP000357.1-201ENST00000409926 1165 ntBASIC3.69□□□□□ -1.82
UBCP0CG48 RANP4-201ENST00000413361 655 ntBASIC3.69□□□□□ -1.82
UBCP0CG48 PRELID3BP11-201ENST00000414230 479 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms