Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU1-13P-201ENST00000384499 162 ntBASIC4.94□□□□□ -1.62
MMP3P08254 AL022722.2-201ENST00000402519 180 ntBASIC4.94□□□□□ -1.62
MMP3P08254 AL034374.1-201ENST00000406329 351 ntBASIC4.94□□□□□ -1.62
MMP3P08254 RNA5SP317-201ENST00000410176 116 ntBASIC4.94□□□□□ -1.62
MMP3P08254 RNA5SP311-201ENST00000411290 116 ntBASIC4.94□□□□□ -1.62
MMP3P08254 HIGD1AP15-201ENST00000416198 280 ntBASIC4.94□□□□□ -1.62
MMP3P08254 VPS26BP1-201ENST00000417155 755 ntBASIC4.94□□□□□ -1.62
MMP3P08254 EIF4A1P1-201ENST00000420241 934 ntBASIC4.94□□□□□ -1.62
MMP3P08254 USP9YP21-201ENST00000420603 432 ntBASIC4.94□□□□□ -1.62
MMP3P08254 DPY19L1P2-201ENST00000426647 915 ntBASIC4.94□□□□□ -1.62
MMP3P08254 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 AC099063.2-201ENST00000446360 662 ntBASIC4.94□□□□□ -1.62
MMP3P08254 AC002553.2-201ENST00000453217 340 ntBASIC4.94□□□□□ -1.62
MMP3P08254 GTF2IP12-201ENST00000456547 356 ntBASIC4.94□□□□□ -1.62
MMP3P08254 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 AC108120.2-201ENST00000512973 294 ntBASIC4.94□□□□□ -1.62
MMP3P08254 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 RNA5SP497-201ENST00000516081 97 ntBASIC4.94□□□□□ -1.62
MMP3P08254 RNA5SP315-201ENST00000516340 116 ntBASIC4.94□□□□□ -1.62
MMP3P08254 RNA5SP312-201ENST00000517068 116 ntBASIC4.94□□□□□ -1.62
MMP3P08254 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.94□□□□□ -1.62
MMP3P08254 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.94□□□□□ -1.62
MMP3P08254 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.94□□□□□ -1.62
MMP3P08254 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.94□□□□□ -1.62
MMP3P08254 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.94□□□□□ -1.62
MMP3P08254 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 AC090181.2-201ENST00000602975 672 ntBASIC4.94□□□□□ -1.62
MMP3P08254 AC004908.3-201ENST00000610248 625 ntBASIC4.94□□□□□ -1.62
MMP3P08254 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
MMP3P08254 RNA5SP196-201ENST00000625967 102 ntBASIC4.94□□□□□ -1.62
MMP3P08254 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 ZNF849P-201ENST00000594711 1566 ntBASIC4.94□□□□□ -1.62
MMP3P08254 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MMP3P08254 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
MMP3P08254 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MMP3P08254 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MMP3P08254 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.93□□□□□ -1.62
MMP3P08254 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MMP3P08254 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
MMP3P08254 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
MMP3P08254 RNU1-64P-201ENST00000365443 163 ntBASIC4.93□□□□□ -1.62
MMP3P08254 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MMP3P08254 MIR23B-201ENST00000384832 97 ntBASIC4.93□□□□□ -1.62
MMP3P08254 RNU6-1320P-201ENST00000390838 107 ntBASIC4.93□□□□□ -1.62
MMP3P08254 RNU6-1269P-201ENST00000391139 107 ntBASIC4.93□□□□□ -1.62
MMP3P08254 FCF1P5-201ENST00000406490 482 ntBASIC4.93□□□□□ -1.62
MMP3P08254 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MMP3P08254 NRBF2P2-201ENST00000413087 861 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AC005005.2-201ENST00000420779 380 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AC246680.2-201ENST00000422106 389 ntBASIC4.93□□□□□ -1.62
MMP3P08254 RPL23AP38-201ENST00000423801 469 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.93□□□□□ -1.62
MMP3P08254 ETF1P3-201ENST00000430422 1160 ntBASIC4.93□□□□□ -1.62
MMP3P08254 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.93□□□□□ -1.62
MMP3P08254 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.93□□□□□ -1.62
MMP3P08254 TCEA1P3-201ENST00000443005 880 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AL591623.2-201ENST00000449978 222 ntBASIC4.93□□□□□ -1.62
MMP3P08254 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.93□□□□□ -1.62
MMP3P08254 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.93□□□□□ -1.62
MMP3P08254 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.93□□□□□ -1.62
MMP3P08254 RNU6-599P-201ENST00000459383 107 ntBASIC4.93□□□□□ -1.62
MMP3P08254 RNU6-1193P-201ENST00000459461 107 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AC021205.1-201ENST00000468797 348 ntBASIC4.93□□□□□ -1.62
MMP3P08254 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.93□□□□□ -1.62
MMP3P08254 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.93□□□□□ -1.62
MMP3P08254 RN7SL691P-201ENST00000494487 301 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.93□□□□□ -1.62
MMP3P08254 AC093534.1-201ENST00000504977 132 ntBASIC4.93□□□□□ -1.62
MMP3P08254 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.93□□□□□ -1.62
MMP3P08254 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.93□□□□□ -1.62
MMP3P08254 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.93□□□□□ -1.62
MMP3P08254 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.93□□□□□ -1.62
MMP3P08254 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.93□□□□□ -1.62
MMP3P08254 AC068993.1-201ENST00000546724 589 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.93□□□□□ -1.62
MMP3P08254 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.93□□□□□ -1.62
MMP3P08254 AC093591.2-201ENST00000565254 3843 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AC106785.1-201ENST00000565935 262 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AC027455.1-201ENST00000574104 594 ntBASIC4.93□□□□□ -1.62
MMP3P08254 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.93□□□□□ -1.62
MMP3P08254 AC010503.3-201ENST00000594355 540 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AL049844.2-201ENST00000604280 628 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AC079610.2-201ENST00000604818 690 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AC011374.2-201ENST00000607135 526 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AL355493.4-201ENST00000618530 292 ntBASIC4.93□□□□□ -1.62
MMP3P08254 AC073569.3-201ENST00000619055 682 ntBASIC4.93□□□□□ -1.62
MMP3P08254 RNU6-368P-201ENST00000620928 107 ntBASIC4.93□□□□□ -1.62
MMP3P08254 RNU6-538P-201ENST00000622329 107 ntBASIC4.93□□□□□ -1.62
MMP3P08254 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MMP3P08254 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms