Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MTCYBP39-201ENST00000437562 491 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 COX7BP2-201ENST00000437976 242 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 CASP3P1-201ENST00000446037 609 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AC233982.1-201ENST00000451247 436 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 VN1R32P-201ENST00000452234 905 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 AL133477.1-201ENST00000457472 514 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AC024909.2-201ENST00000553035 286 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AP001269.3-201ENST00000588718 329 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DOAP06340 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AL049737.1-201ENST00000413920 1403 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AC109446.4-201ENST00000623235 2755 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DOAP06340 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DOAP06340 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DOAP06340 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DOAP06340 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DOAP06340 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC126755.2-208ENST00000327792 462 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC138969.1-213ENST00000331436 462 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 FAM133CP-201ENST00000332869 704 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 IGKV7-3-201ENST00000357453 298 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AL121978.1-201ENST00000402778 359 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 SETP15-201ENST00000412724 337 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 MTCO3P30-201ENST00000426425 670 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AL138787.1-202ENST00000437804 898 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 RPL34P26-201ENST00000445636 354 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 RPL7P32-201ENST00000457119 744 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 RN7SL385P-201ENST00000468873 276 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC104763.1-201ENST00000475274 360 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 RPL23AP44-201ENST00000482216 473 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC023050.1-201ENST00000498198 304 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC107401.1-201ENST00000503426 685 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC119751.1-201ENST00000513357 765 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 NPM1P21-201ENST00000513394 762 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AP001781.1-201ENST00000530977 207 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AL391156.1-201ENST00000554965 554 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 SETP1-201ENST00000556014 845 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 MIR4277-201ENST00000578298 84 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 VN1R83P-201ENST00000595685 445 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AP002906.1-201ENST00000603405 233 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC019131.2-201ENST00000609071 870 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AL354976.1-201ENST00000613843 387 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC073569.3-201ENST00000619055 682 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 MIR6758-201ENST00000620653 63 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 AC091931.1-201ENST00000623488 728 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 AL133268.1-201ENST00000405676 1401 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DOAP06340 MTND4P26-201ENST00000415971 1359 ntBASIC5.55□□□□□ -1.52
HLA-DOAP06340 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC108751.5-201ENST00000492880 1336 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC104446.1-201ENST00000613728 1321 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms