Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SPTA1P02549 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SPTA1P02549 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.53□□□□□ -1.84
SPTA1P02549 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SPTA1P02549 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.53□□□□□ -1.84
SPTA1P02549 RPS11P1-201ENST00000451072 473 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.53□□□□□ -1.84
SPTA1P02549 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.53□□□□□ -1.84
SPTA1P02549 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.53□□□□□ -1.84
SPTA1P02549 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SPTA1P02549 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SPTA1P02549 QTRT1P1-201ENST00000604344 1078 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 COX6CP4-201ENST00000605798 228 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 AC009159.1-201ENST00000618386 642 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 RALGAPA1P1-201ENST00000443361 6232 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.53□□□□□ -1.84
SPTA1P02549 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.53□□□□□ -1.84
SPTA1P02549 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SPTA1P02549 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SPTA1P02549 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SPTA1P02549 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SPTA1P02549 PEX12P1-201ENST00000400284 1048 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 RPL7AP73-201ENST00000413490 353 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 AC092641.1-201ENST00000440229 772 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 RPL5P12-201ENST00000477071 851 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 AC104619.4-201ENST00000510773 249 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 MTND1P6-201ENST00000523621 946 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.53□□□□□ -1.84
SPTA1P02549 NPM1P47-201ENST00000560843 856 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.53□□□□□ -1.84
SPTA1P02549 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.53□□□□□ -1.84
SPTA1P02549 SNX6P1-201ENST00000601728 1224 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 AC006077.1-201ENST00000604746 343 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
SPTA1P02549 ZNF826P-207ENST00000622273 1910 ntBASIC3.53□□□□□ -1.84
SPTA1P02549 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.53□□□□□ -1.84
SPTA1P02549 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SPTA1P02549 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SPTA1P02549 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.52□□□□□ -1.85
SPTA1P02549 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SPTA1P02549 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.52□□□□□ -1.85
SPTA1P02549 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.52□□□□□ -1.85
SPTA1P02549 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.52□□□□□ -1.85
SPTA1P02549 HMGB3P16-201ENST00000508037 287 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.52□□□□□ -1.85
SPTA1P02549 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.52□□□□□ -1.85
SPTA1P02549 MIR4276-201ENST00000584832 70 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 RNA5SP439-201ENST00000617595 124 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 AL139089.1-201ENST00000620372 975 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.52□□□□□ -1.85
SPTA1P02549 AC005831.1-201ENST00000624384 1697 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SPTA1P02549 AC083843.3-201ENST00000623679 2186 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 HSPD1P14-201ENST00000432666 1618 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 SNORD35B-201ENST00000363660 87 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
SPTA1P02549 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.52□□□□□ -1.85
SPTA1P02549 HMGB1P18-201ENST00000438801 619 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 RPS15AP29-201ENST00000445539 400 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 NANOGNBP1-201ENST00000448444 480 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 EIF4A1P11-201ENST00000451239 222 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 AC018635.1-201ENST00000468292 1030 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.52□□□□□ -1.85
SPTA1P02549 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.52□□□□□ -1.85
SPTA1P02549 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.52□□□□□ -1.85
SPTA1P02549 AL031666.3-201ENST00000609320 1006 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.52□□□□□ -1.85
SPTA1P02549 AC092376.2-201ENST00000622621 4116 ntBASIC3.52□□□□□ -1.85
SPTA1P02549 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SPTA1P02549 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SPTA1P02549 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SPTA1P02549 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SPTA1P02549 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SPTA1P02549 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SPTA1P02549 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SPTA1P02549 AL731532.2-201ENST00000623542 1953 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 AC097713.2-201ENST00000430199 356 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 AL133162.1-201ENST00000463228 453 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SPTA1P02549 AP000563.1-201ENST00000490865 758 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.51□□□□□ -1.85
SPTA1P02549 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.51□□□□□ -1.85
SPTA1P02549 AL353726.1-201ENST00000614041 1000 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SPTA1P02549 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SPTA1P02549 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SPTA1P02549 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SPTA1P02549 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SPTA1P02549 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SPTA1P02549 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.51□□□□□ -1.85
SPTA1P02549 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.51□□□□□ -1.85
SPTA1P02549 RPS27AP15-201ENST00000447672 466 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 RAB28P3-201ENST00000448325 597 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 KC877373.1-201ENST00000479066 408 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.51□□□□□ -1.85
SPTA1P02549 Y_RNA.676-201ENST00000516393 96 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.51□□□□□ -1.85
SPTA1P02549 AL137849.1-201ENST00000604767 169 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 AC019278.1-201ENST00000623516 479 ntBASIC3.51□□□□□ -1.85
SPTA1P02549 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms