Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC124068.1-201ENST00000563131 678 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPTM1O96005 MIR4716-201ENST00000579628 84 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 MIR4646-201ENST00000580775 63 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.31□□□□□ -1.72
CLPTM1O96005 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLPTM1O96005 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPTM1O96005 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AC087683.2-201ENST00000611384 326 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AC091905.4-201ENST00000623432 202 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AC083865.1-201ENST00000636634 831 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 AC132825.7-201ENST00000638744 335 ntBASIC4.31□□□□□ -1.72
CLPTM1O96005 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPTM1O96005 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLPTM1O96005 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLPTM1O96005 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.31□□□□□ -1.72
CLPTM1O96005 AC131971.1-201ENST00000332881 1482 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLPTM1O96005 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLPTM1O96005 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLPTM1O96005 RN7SKP95-201ENST00000362860 303 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 RNU5B-1-201ENST00000363286 116 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLPTM1O96005 MIR142-201ENST00000384835 87 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AL109941.1-201ENST00000401925 229 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 ZNF602P-201ENST00000405929 924 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.3□□□□□ -1.72
CLPTM1O96005 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLPTM1O96005 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 LINC01347-201ENST00000417964 355 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AF186996.5-201ENST00000418098 904 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AL137845.2-201ENST00000444292 988 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AC000111.2-201ENST00000448200 210 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 TRY2P-201ENST00000448860 689 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 HMGB3P21-201ENST00000452483 547 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AL139824.2-201ENST00000458731 1095 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 RN7SL319P-201ENST00000480656 221 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC093720.1-201ENST00000505681 714 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 NDUFB5P1-201ENST00000508134 564 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.3□□□□□ -1.72
CLPTM1O96005 HPRT1P1-201ENST00000509498 657 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 OR8G5-201ENST00000524943 1041 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 OR5AZ1P-201ENST00000527448 943 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.3□□□□□ -1.72
CLPTM1O96005 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.3□□□□□ -1.72
CLPTM1O96005 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AL049870.4-201ENST00000555741 486 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 MTCYBP23-201ENST00000558717 1102 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.3□□□□□ -1.72
CLPTM1O96005 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AL160237.3-201ENST00000604114 1013 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AC010680.3-201ENST00000604215 520 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 MEMO1P5-201ENST00000604810 406 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC078899.5-201ENST00000612475 178 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AC022079.2-201ENST00000619739 566 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AC010435.1-201ENST00000623353 1177 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 AL353662.3-201ENST00000625131 237 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.3□□□□□ -1.72
CLPTM1O96005 AC018555.1-201ENST00000567548 1980 ntBASIC4.3□□□□□ -1.72
CLPTM1O96005 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CLPTM1O96005 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLPTM1O96005 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.3□□□□□ -1.72
CLPTM1O96005 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLPTM1O96005 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLPTM1O96005 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.29□□□□□ -1.72
CLPTM1O96005 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC017007.4-201ENST00000503353 1352 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLPTM1O96005 AL132640.2-201ENST00000559968 1698 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLPTM1O96005 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms