Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 RPS26P40-201ENST00000435209 294 ntBASIC4.33□□□□□ -1.72
SSX4O60224 RHOT1P3-201ENST00000436571 331 ntBASIC4.33□□□□□ -1.72
SSX4O60224 Z80107.1-201ENST00000436830 412 ntBASIC4.33□□□□□ -1.72
SSX4O60224 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 AC073052.1-201ENST00000440417 714 ntBASIC4.33□□□□□ -1.72
SSX4O60224 RPL34P20-201ENST00000442771 351 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL137845.2-201ENST00000444292 988 ntBASIC4.33□□□□□ -1.72
SSX4O60224 MTCYBP42-201ENST00000444653 1130 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 EEF1A1P1-201ENST00000447052 739 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AC009220.1-201ENST00000451614 275 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL691482.1-201ENST00000453255 87 ntBASIC4.33□□□□□ -1.72
SSX4O60224 RPS29P33-201ENST00000456717 146 ntBASIC4.33□□□□□ -1.72
SSX4O60224 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX4O60224 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 AC108729.1-201ENST00000487812 947 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SSX4O60224 AC008897.1-201ENST00000494006 347 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 MTCO3P15-201ENST00000526563 574 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX4O60224 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.33□□□□□ -1.72
SSX4O60224 AC087477.6-201ENST00000559595 843 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.33□□□□□ -1.72
SSX4O60224 AC009117.1-201ENST00000563948 554 ntBASIC4.33□□□□□ -1.72
SSX4O60224 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX4O60224 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX4O60224 AP001542.2-201ENST00000593141 364 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL583856.2-201ENST00000606298 543 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AP005432.2-201ENST00000608162 586 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL627230.1-201ENST00000613077 211 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL591926.8-201ENST00000616876 211 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL035461.2-201ENST00000619201 524 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AC123767.1-202ENST00000620407 817 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL023881.1-201ENST00000621088 301 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL078595.3-201ENST00000623815 1166 ntBASIC4.33□□□□□ -1.72
SSX4O60224 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.33□□□□□ -1.72
SSX4O60224 DHX9P1-201ENST00000436565 3076 ntBASIC4.33□□□□□ -1.72
SSX4O60224 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX4O60224 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX4O60224 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX4O60224 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX4O60224 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX4O60224 AL451142.2-201ENST00000429076 2090 ntBASIC4.33□□□□□ -1.72
SSX4O60224 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX4O60224 OR14L1P-202ENST00000641545 3009 ntBASIC4.32□□□□□ -1.72
SSX4O60224 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SSX4O60224 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 KPNA2P2-201ENST00000419546 1489 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.32□□□□□ -1.72
SSX4O60224 AC107068.1-201ENST00000563286 4218 ntBASIC4.32□□□□□ -1.72
SSX4O60224 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX4O60224 MTND4P26-201ENST00000415971 1359 ntBASIC4.32□□□□□ -1.72
SSX4O60224 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.32□□□□□ -1.72
SSX4O60224 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX4O60224 OR1L1-202ENST00000373686 1083 ntBASIC4.32□□□□□ -1.72
SSX4O60224 RNU6-146P-201ENST00000384602 108 ntBASIC4.32□□□□□ -1.72
SSX4O60224 MIR141-201ENST00000384975 95 ntBASIC4.32□□□□□ -1.72
SSX4O60224 FAR2P2-201ENST00000413041 594 ntBASIC4.32□□□□□ -1.72
SSX4O60224 RPL21P108-201ENST00000413857 481 ntBASIC4.32□□□□□ -1.72
SSX4O60224 QRSL1P2-201ENST00000418582 964 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AC245028.1-201ENST00000423259 256 ntBASIC4.32□□□□□ -1.72
SSX4O60224 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX4O60224 RPL12P34-201ENST00000424532 479 ntBASIC4.32□□□□□ -1.72
SSX4O60224 FAR2P4-202ENST00000425399 584 ntBASIC4.32□□□□□ -1.72
SSX4O60224 COX6CP13-201ENST00000428703 226 ntBASIC4.32□□□□□ -1.72
SSX4O60224 RPL12P28-201ENST00000430852 489 ntBASIC4.32□□□□□ -1.72
SSX4O60224 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 ELOCP11-201ENST00000436690 332 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX4O60224 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SSX4O60224 OR10R1P-201ENST00000441524 1141 ntBASIC4.32□□□□□ -1.72
SSX4O60224 ELOCP16-201ENST00000444494 332 ntBASIC4.32□□□□□ -1.72
SSX4O60224 KNOP1P3-201ENST00000446933 426 ntBASIC4.32□□□□□ -1.72
SSX4O60224 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SSX4O60224 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX4O60224 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.32□□□□□ -1.72
SSX4O60224 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.32□□□□□ -1.72
SSX4O60224 RN7SL319P-201ENST00000480656 221 ntBASIC4.32□□□□□ -1.72
SSX4O60224 RPS27P23-201ENST00000487608 251 ntBASIC4.32□□□□□ -1.72
SSX4O60224 CEACAMP10-202ENST00000495431 496 ntBASIC4.32□□□□□ -1.72
SSX4O60224 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.32□□□□□ -1.72
SSX4O60224 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX4O60224 PGBD4P4-201ENST00000509673 613 ntBASIC4.32□□□□□ -1.72
SSX4O60224 OR7H2P-201ENST00000513483 306 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX4O60224 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX4O60224 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.32□□□□□ -1.72
SSX4O60224 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms