Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU2-50P-201ENST00000410494 143 ntBASIC4.66□□□□□ -1.66
LDB2O43679 ELOCP9-201ENST00000418624 239 ntBASIC4.66□□□□□ -1.66
LDB2O43679 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 Z74021.1-201ENST00000423610 407 ntBASIC4.66□□□□□ -1.66
LDB2O43679 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.66□□□□□ -1.66
LDB2O43679 YWHAEP5-201ENST00000431545 765 ntBASIC4.66□□□□□ -1.66
LDB2O43679 FTH1P16-201ENST00000435241 552 ntBASIC4.66□□□□□ -1.66
LDB2O43679 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.66□□□□□ -1.66
LDB2O43679 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 TPT1P13-201ENST00000449760 499 ntBASIC4.66□□□□□ -1.66
LDB2O43679 RPS29P33-201ENST00000456717 146 ntBASIC4.66□□□□□ -1.66
LDB2O43679 RNA5SP103-201ENST00000459503 118 ntBASIC4.66□□□□□ -1.66
LDB2O43679 RPL23AP37-201ENST00000479658 549 ntBASIC4.66□□□□□ -1.66
LDB2O43679 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
LDB2O43679 AC011005.3-201ENST00000491624 395 ntBASIC4.66□□□□□ -1.66
LDB2O43679 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.66□□□□□ -1.66
LDB2O43679 RNU6-513P-201ENST00000516104 104 ntBASIC4.66□□□□□ -1.66
LDB2O43679 AC083923.1-201ENST00000523708 376 ntBASIC4.66□□□□□ -1.66
LDB2O43679 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 MTCO3P15-201ENST00000526563 574 ntBASIC4.66□□□□□ -1.66
LDB2O43679 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 AC008083.2-201ENST00000546707 476 ntBASIC4.66□□□□□ -1.66
LDB2O43679 AC063949.1-201ENST00000552900 865 ntBASIC4.66□□□□□ -1.66
LDB2O43679 MTCYBP27-201ENST00000555160 670 ntBASIC4.66□□□□□ -1.66
LDB2O43679 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.66□□□□□ -1.66
LDB2O43679 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.66□□□□□ -1.66
LDB2O43679 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.66□□□□□ -1.66
LDB2O43679 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.66□□□□□ -1.66
LDB2O43679 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.66□□□□□ -1.66
LDB2O43679 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.66□□□□□ -1.66
LDB2O43679 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
LDB2O43679 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.66□□□□□ -1.66
LDB2O43679 uc_338.18-201ENST00000615451 175 ntBASIC4.66□□□□□ -1.66
LDB2O43679 AC024595.1-201ENST00000623088 387 ntBASIC4.66□□□□□ -1.66
LDB2O43679 AC017037.3-201ENST00000625016 472 ntBASIC4.66□□□□□ -1.66
LDB2O43679 AC104260.2-201ENST00000623551 3497 ntBASIC4.66□□□□□ -1.66
LDB2O43679 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LDB2O43679 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDB2O43679 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LDB2O43679 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.66□□□□□ -1.66
LDB2O43679 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.66□□□□□ -1.66
LDB2O43679 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LDB2O43679 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.66□□□□□ -1.66
LDB2O43679 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LDB2O43679 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.65□□□□□ -1.66
LDB2O43679 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LDB2O43679 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.65□□□□□ -1.66
LDB2O43679 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
LDB2O43679 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
LDB2O43679 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.65□□□□□ -1.66
LDB2O43679 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LDB2O43679 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LDB2O43679 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LDB2O43679 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LDB2O43679 AL590240.1-201ENST00000334118 313 ntBASIC4.65□□□□□ -1.67
LDB2O43679 RNU6-1214P-201ENST00000363650 109 ntBASIC4.65□□□□□ -1.67
LDB2O43679 SNORD116-8-201ENST00000384365 95 ntBASIC4.65□□□□□ -1.67
LDB2O43679 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LDB2O43679 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.65□□□□□ -1.67
LDB2O43679 SETP15-201ENST00000412724 337 ntBASIC4.65□□□□□ -1.67
LDB2O43679 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LDB2O43679 ATG4AP1-201ENST00000416893 538 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AL807761.1-201ENST00000417622 171 ntBASIC4.65□□□□□ -1.67
LDB2O43679 RPL21P43-201ENST00000425440 472 ntBASIC4.65□□□□□ -1.67
LDB2O43679 RAC1P8-201ENST00000427086 527 ntBASIC4.65□□□□□ -1.67
LDB2O43679 TXNL1P1-201ENST00000429528 554 ntBASIC4.65□□□□□ -1.67
LDB2O43679 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.65□□□□□ -1.67
LDB2O43679 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.65□□□□□ -1.67
LDB2O43679 AC092473.1-201ENST00000441098 221 ntBASIC4.65□□□□□ -1.67
LDB2O43679 ARL5AP2-201ENST00000444698 533 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.65□□□□□ -1.67
LDB2O43679 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.65□□□□□ -1.67
LDB2O43679 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.65□□□□□ -1.67
LDB2O43679 AC091951.3-201ENST00000504093 246 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.65□□□□□ -1.67
LDB2O43679 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.65□□□□□ -1.67
LDB2O43679 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.65□□□□□ -1.67
LDB2O43679 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.65□□□□□ -1.67
LDB2O43679 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.65□□□□□ -1.67
LDB2O43679 OR4A2P-201ENST00000527276 913 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.65□□□□□ -1.67
LDB2O43679 DUXAP6-201ENST00000553858 601 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.65□□□□□ -1.67
LDB2O43679 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.65□□□□□ -1.67
LDB2O43679 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LDB2O43679 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.65□□□□□ -1.67
LDB2O43679 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.65□□□□□ -1.67
LDB2O43679 DPRXP4-201ENST00000578053 568 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AC015688.2-201ENST00000584523 262 ntBASIC4.65□□□□□ -1.67
LDB2O43679 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.65□□□□□ -1.67
LDB2O43679 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.65□□□□□ -1.67
LDB2O43679 AC097505.1-201ENST00000610199 565 ntBASIC4.65□□□□□ -1.67
LDB2O43679 TUSC7.1-201ENST00000610969 165 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AC084782.3-201ENST00000612282 578 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms