Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC037198.2-201ENST00000478845 733 ntBASIC3.73□□□□□ -1.81
UPK1AO00322 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.73□□□□□ -1.81
UPK1AO00322 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.73□□□□□ -1.81
UPK1AO00322 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.73□□□□□ -1.81
UPK1AO00322 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.73□□□□□ -1.81
UPK1AO00322 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.73□□□□□ -1.81
UPK1AO00322 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
UPK1AO00322 AL133457.1-201ENST00000564251 987 ntBASIC3.73□□□□□ -1.81
UPK1AO00322 AP005901.4-201ENST00000577336 569 ntBASIC3.73□□□□□ -1.81
UPK1AO00322 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.73□□□□□ -1.81
UPK1AO00322 SNX6P1-201ENST00000601728 1224 ntBASIC3.73□□□□□ -1.81
UPK1AO00322 MIR378J-201ENST00000611988 109 ntBASIC3.73□□□□□ -1.81
UPK1AO00322 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.73□□□□□ -1.81
UPK1AO00322 MIR492-201ENST00000638676 116 ntBASIC3.73□□□□□ -1.81
UPK1AO00322 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
UPK1AO00322 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
UPK1AO00322 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.73□□□□□ -1.81
UPK1AO00322 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
UPK1AO00322 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
UPK1AO00322 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.73□□□□□ -1.81
UPK1AO00322 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
UPK1AO00322 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
UPK1AO00322 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC134882.1-201ENST00000603738 1676 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UPK1AO00322 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
UPK1AO00322 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
UPK1AO00322 AL121657.1-201ENST00000327215 531 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 RNA5SP399-201ENST00000364003 117 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 SNORA70C-201ENST00000384538 135 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 RPS26P8-201ENST00000393490 348 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AL138878.1-201ENST00000405131 347 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 RHEBP3-201ENST00000411920 351 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC009302.1-201ENST00000417147 390 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AL356095.1-201ENST00000417217 199 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.72□□□□□ -1.81
UPK1AO00322 HMGB1P32-201ENST00000425971 565 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 RPL23AP4-201ENST00000427757 463 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 MTND2P2-201ENST00000434633 945 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.72□□□□□ -1.81
UPK1AO00322 AL132838.2-201ENST00000492041 314 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC004069.2-201ENST00000505438 1114 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.72□□□□□ -1.81
UPK1AO00322 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.72□□□□□ -1.81
UPK1AO00322 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.72□□□□□ -1.81
UPK1AO00322 OR8X1P-201ENST00000534542 869 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC091516.1-201ENST00000549191 703 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.72□□□□□ -1.81
UPK1AO00322 EIF1P6-201ENST00000600054 334 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.72□□□□□ -1.81
UPK1AO00322 AC083809.1-201ENST00000615051 472 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AC006338.2-201ENST00000616864 791 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AC020763.5-201ENST00000623298 430 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.72□□□□□ -1.81
UPK1AO00322 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.72□□□□□ -1.81
UPK1AO00322 CASC19-261ENST00000641853 1638 ntBASIC3.72□□□□□ -1.81
UPK1AO00322 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UPK1AO00322 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.72□□□□□ -1.81
UPK1AO00322 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
UPK1AO00322 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1AO00322 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1AO00322 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1AO00322 SNORA62-201ENST00000365493 153 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1AO00322 AL022722.2-201ENST00000402519 180 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.71□□□□□ -1.82
UPK1AO00322 RPL7AP73-201ENST00000413490 353 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1AO00322 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 MTCYBP7-201ENST00000419540 1134 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1AO00322 HIGD1AP4-201ENST00000430194 280 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 AL365396.1-201ENST00000430854 671 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 TBCAP1-201ENST00000436520 327 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1AO00322 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1AO00322 AC092809.1-201ENST00000441469 474 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 CASP3P1-201ENST00000446037 609 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 AC099063.2-201ENST00000446360 662 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1AO00322 AC106872.2-201ENST00000494303 480 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1AO00322 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1AO00322 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1AO00322 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.71□□□□□ -1.82
UPK1AO00322 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1AO00322 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1AO00322 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1AO00322 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.71□□□□□ -1.82
UPK1AO00322 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms