Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 SNORA60-201ENST00000362396 134 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNA5SP322-201ENST00000363617 119 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 OR8G2P-201ENST00000412796 908 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC01881-201ENST00000416103 412 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 MTND2P25-201ENST00000449028 610 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 RPL7P1-201ENST00000468161 747 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 RPL7P9-201ENST00000468715 747 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC022034.3-201ENST00000471393 478 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC110792.1-201ENST00000491826 472 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 FTH1P21-201ENST00000512179 511 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU6-943P-201ENST00000516960 98 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 EIF1AXP2-201ENST00000555940 413 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 SULT1C2P2-201ENST00000562517 294 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC005034.4-201ENST00000603612 899 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC107308.1-201ENST00000615897 301 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC099669.2-201ENST00000616549 437 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC083899.2-201ENST00000423285 1376 ntBASIC4.02□□□□□ -1.77
TMX2-CTNND1H3BSU7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL445437.1-201ENST00000623157 3087 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL929601.4-201ENST00000613011 1341 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL589994.1-201ENST00000404962 340 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 TCEA1P4-201ENST00000415066 844 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC115285.1-201ENST00000424879 736 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 RPL7P4-203ENST00000430239 730 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 ARL4AP4-201ENST00000434170 518 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC091564.1-201ENST00000464563 479 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 SYT14P1-201ENST00000481459 721 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC146944.2-203ENST00000502493 354 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC139495.1-202ENST00000513164 354 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 MIR2114-201ENST00000516645 80 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC015911.5-201ENST00000587076 451 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL451142.2-201ENST00000429076 2090 ntBASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.01□□□□□ -1.77
TMX2-CTNND1H3BSU7 MTCO1P8-201ENST00000416914 1523 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU11-4P-201ENST00000391149 133 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL583835.1-201ENST00000399570 407 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 RPL23AP48-201ENST00000406913 488 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL161631.1-201ENST00000417933 486 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC092647.1-201ENST00000420654 287 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AF228730.2-201ENST00000438784 848 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms