Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC026368.1-201ENST00000614934 690 ntBASIC4.09□□□□□ -1.75
NPIPA2E9PIF3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.09□□□□□ -1.75
NPIPA2E9PIF3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.09□□□□□ -1.75
NPIPA2E9PIF3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPIPA2E9PIF3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NPIPA2E9PIF3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NPIPA2E9PIF3 AL133412.1-201ENST00000380194 2992 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 Y_RNA.110-201ENST00000363220 99 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 MIR921-201ENST00000401133 56 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AP000357.1-201ENST00000409926 1165 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 RPL21P108-201ENST00000413857 481 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 TATDN1P1-201ENST00000414123 891 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 TMSB10P2-201ENST00000416049 131 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC007529.1-201ENST00000418574 2178 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 OR2X1P-201ENST00000421144 687 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 Z74021.1-201ENST00000423610 407 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AP001324.1-201ENST00000428553 399 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 RPL7P29-201ENST00000437151 728 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC074367.1-201ENST00000438685 1125 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 RPL37P3-201ENST00000456825 293 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 NPM1P17-201ENST00000479221 602 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 ADAD1P2-201ENST00000588476 646 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC010680.3-201ENST00000604215 520 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 RPL21P136-201ENST00000605378 396 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC011374.2-201ENST00000607135 526 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 MIR6716-201ENST00000613413 80 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC245389.2-201ENST00000616023 576 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC242843.1-201ENST00000618702 573 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 AC009951.1-201ENST00000623674 2614 ntBASIC4.08□□□□□ -1.76
NPIPA2E9PIF3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 OR4K17-201ENST00000315543 1032 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 RN7SKP227-201ENST00000364445 330 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 MIR3074-201ENST00000384885 81 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 OR6C69P-201ENST00000394268 893 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 PTGES3P2-201ENST00000407942 482 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AC011933.1-201ENST00000413334 321 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 SNRPFP1-201ENST00000414761 252 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 FTH1P6-201ENST00000430768 320 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 RPS29P17-201ENST00000430795 166 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 RNFT1P2-201ENST00000443064 757 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AC069540.1-201ENST00000446320 988 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AL645939.1-201ENST00000453429 797 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AC116533.1-201ENST00000459748 321 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 RN7SL303P-201ENST00000469773 251 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AC108022.1-201ENST00000493466 478 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AC010476.1-201ENST00000519111 851 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 AC022790.1-201ENST00000522872 204 ntBASIC4.07□□□□□ -1.76
NPIPA2E9PIF3 OR4A2P-201ENST00000527276 913 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms