Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC117382.1-201ENST00000468074 730 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AL161747.1-201ENST00000480068 358 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC021205.2-201ENST00000480069 347 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 RN7SL499P-201ENST00000481141 276 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 HMGB3P14-201ENST00000494195 599 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 RPL29P14-201ENST00000495837 428 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC118282.1-201ENST00000506408 765 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC119751.1-201ENST00000513357 765 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 RNA5SP179-201ENST00000517284 121 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 MIR212-201ENST00000586026 110 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC095055.1-201ENST00000603472 1113 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 YWHAQP7-201ENST00000603536 658 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC012368.3-201ENST00000604190 219 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC005084.1-201ENST00000605160 304 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC096586.2-201ENST00000610260 441 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AC093908.1-201ENST00000623125 8092 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AL353743.1-202ENST00000431724 1695 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 AL136164.4-201ENST00000625013 2135 ntBASIC1.96□□□□□ -2.1
LINC01558Q9Y6Z2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 SNORA17.1-201ENST00000362945 126 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 SNORD35B-201ENST00000363660 87 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 RNA5SP234-201ENST00000363916 119 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 RNU1-132P-201ENST00000364300 164 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 MIR153-1-201ENST00000384914 90 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 HIST1H2APS3-201ENST00000403259 134 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AL034374.1-201ENST00000406329 351 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AL354719.1-201ENST00000406535 843 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AL390774.1-201ENST00000411924 246 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 RANP4-201ENST00000413361 655 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 RPL7AP73-201ENST00000413490 353 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 RPL31P2-201ENST00000413849 377 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 OR1AA1P-201ENST00000419597 916 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 OR5BE1P-201ENST00000425977 939 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 PNKDP1-201ENST00000435914 430 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AL138899.2-201ENST00000439139 499 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AL031681.1-201ENST00000443304 400 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 CCRL1P1-201ENST00000449542 1053 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 RPL36AP33-201ENST00000450395 310 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 HMGN2P16-201ENST00000456802 261 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC093267.1-201ENST00000489176 961 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC108078.3-201ENST00000502633 489 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 ARL4AP2-201ENST00000507378 601 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC104986.1-201ENST00000517978 436 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 SEC11B-201ENST00000518383 499 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC239860.2-201ENST00000525886 270 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC024270.2-201ENST00000568441 499 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC100832.2-201ENST00000582080 776 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC079587.1-201ENST00000603846 277 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 U91328.4-201ENST00000608919 517 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 Mico1.1-201ENST00000611698 204 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms