Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 RN7SKP265-201ENST00000516448 223 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 C1GALT1P3-201ENST00000522049 819 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AP000827.1-201ENST00000527814 258 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 GSTP1P1-201ENST00000548078 319 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC018552.3-201ENST00000567416 561 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 IMMP1LP1-201ENST00000605170 488 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 SNORD91B-202ENST00000608459 222 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC020634.1-201ENST00000608701 549 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC012409.3-201ENST00000611343 981 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC131238.1-201ENST00000617135 328 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC234782.5-201ENST00000617723 324 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AL669942.2-201ENST00000620352 697 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 OR2L1P-202ENST00000641567 1023 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC125257.1-201ENST00000560400 2930 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SNX9Q9Y5X1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.84□□□□□ -1.64
SNX9Q9Y5X1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
SNX9Q9Y5X1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
SNX9Q9Y5X1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.84□□□□□ -1.64
SNX9Q9Y5X1 CPHL1P-201ENST00000461341 3407 ntBASIC4.84□□□□□ -1.64
SNX9Q9Y5X1 AC025031.4-201ENST00000621248 3271 ntBASIC4.84□□□□□ -1.64
SNX9Q9Y5X1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AL133268.1-201ENST00000405676 1401 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 RNU6-304P-201ENST00000364855 107 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 MIR141-201ENST00000384975 95 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 U3.22-201ENST00000391120 215 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 RN7SKP222-201ENST00000410651 315 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 SSR1P2-201ENST00000415208 787 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC073136.2-201ENST00000417282 849 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 RAD23BP1-201ENST00000421404 1227 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 FTH1P16-201ENST00000435241 552 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 RPL12P46-201ENST00000436610 195 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 RPL23AP43-201ENST00000446445 471 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC108751.2-201ENST00000469993 231 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC025459.1-201ENST00000504072 156 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC139103.1-201ENST00000534696 1030 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 RNF138P2-201ENST00000603490 592 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC025175.1-201ENST00000606482 759 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AL121873.1-201ENST00000616013 524 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 RMST_10.1-201ENST00000616309 154 ntBASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SNX9Q9Y5X1 LINC00622-201ENST00000562811 1570 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 MAPK10-304ENST00000641341 3984 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AP002784.2-201ENST00000397300 549 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 FCF1P5-201ENST00000406490 482 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms