Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 CHIAP3-201ENST00000423668 1133 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 Z82205.1-201ENST00000428456 297 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 IPO7P1-201ENST00000442031 636 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 VN1R38P-201ENST00000450265 887 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AL035090.1-201ENST00000454835 332 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 Y_RNA.635-201ENST00000459041 101 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC068587.1-201ENST00000483613 781 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC005912.1-201ENST00000495392 255 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL23AP80-201ENST00000495605 424 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC091965.3-201ENST00000506236 208 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 Y_RNA.718-201ENST00000517110 102 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 IGKV1D-32-201ENST00000517449 318 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC008055.1-201ENST00000547032 609 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC091304.5-201ENST00000568969 158 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC105224.1-201ENST00000587055 421 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AL080274.1-201ENST00000605565 220 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC006924.1-201ENST00000610750 559 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC245407.2-201ENST00000614199 451 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 SNORA16A-202ENST00000628458 135 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 MTND5P1-201ENST00000445440 1375 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AP004289.2-201ENST00000444413 1457 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AP000432.2-201ENST00000624164 2048 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 SAMMSON-210ENST00000641260 1308 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 OLMALINC-203ENST00000641087 3779 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 RN7SKP189-201ENST00000365042 330 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 SNORA70.3-201ENST00000365075 132 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 RNA5SP176-201ENST00000390956 110 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AL161742.1-201ENST00000418154 584 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL36AP36-201ENST00000418616 301 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AL590639.1-201ENST00000456484 337 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 MTND4P17-201ENST00000470444 350 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 RN7SL390P-201ENST00000470634 284 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 ST13P14-201ENST00000474095 734 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 RN7SL849P-201ENST00000485236 295 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 TTC39CP1-201ENST00000512513 755 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AC018797.3-201ENST00000513388 1241 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AC018552.3-201ENST00000567416 561 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 RN7SL689P-201ENST00000577215 297 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 MIR3668-201ENST00000582138 75 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 CYP2C61P-201ENST00000604072 290 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 OR6R2P-201ENST00000609216 300 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 uc_338.15-201ENST00000615470 191 ntBASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms