Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 RPL7P4-203ENST00000430239 730 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC114495.1-201ENST00000441274 436 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 FHP1-201ENST00000442741 703 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC092647.3-201ENST00000443044 633 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 CALM1P2-201ENST00000452941 448 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 RPL21P18-201ENST00000469899 480 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 RN7SL30P-201ENST00000488416 306 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC109458.1-201ENST00000508858 316 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 CIR1P1-201ENST00000524055 1133 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 YWHAZP1-201ENST00000556286 722 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC023825.1-201ENST00000566704 1030 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC084373.1-201ENST00000603311 235 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AL133338.2-201ENST00000604292 736 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC211433.2-201ENST00000608433 387 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC007275.1-201ENST00000621243 671 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC091905.4-201ENST00000623432 202 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC090772.4-201ENST00000623599 362 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC134882.1-201ENST00000603738 1676 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 MTND5P11-201ENST00000511037 1812 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 SNORD66.1-201ENST00000391230 76 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 GLULP6-201ENST00000399502 913 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AP000534.2-201ENST00000412729 568 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 RSU1P3-201ENST00000412878 835 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AL450992.3-201ENST00000413192 568 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 MTCO1P43-201ENST00000431831 488 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 RPL23AP89-201ENST00000439324 255 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 CASP3P1-201ENST00000446037 609 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC069540.1-201ENST00000446320 988 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 RPL23AP43-201ENST00000446445 471 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 RPS27AP17-201ENST00000463344 455 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC008379.1-201ENST00000463655 464 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 COPS8P2-201ENST00000473228 627 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC069499.1-201ENST00000489433 509 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 MTND4LP2-201ENST00000502312 285 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC010374.1-201ENST00000503762 1237 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 ATP5LP3-201ENST00000514223 304 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AP000916.1-201ENST00000533869 835 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 MIR4489-201ENST00000578869 62 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC011492.1-201ENST00000600023 315 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms