Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TM9SF3Q9HD45 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.39□□□□□ -1.71
TM9SF3Q9HD45 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TM9SF3Q9HD45 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 MIR124-3-201ENST00000384866 87 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 MIR3065-201ENST00000390137 79 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 SNORA11F-201ENST00000408237 128 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 RN7SKP177-201ENST00000410567 355 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 RNA5SP104-201ENST00000410989 118 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 RPS12P23-201ENST00000419579 400 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 RPL23AP52-201ENST00000439311 478 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AL359073.1-201ENST00000448036 403 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 MTND2P8-201ENST00000450555 1025 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 FGF7P3-201ENST00000454645 303 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC012158.1-204ENST00000483430 465 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC012170.1-201ENST00000495139 359 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 HMGB1P21-201ENST00000502313 581 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 FABP5P6-201ENST00000510588 409 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 HMGB1P47-201ENST00000511281 589 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 RNA5SP446-201ENST00000515955 82 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 RNA5SP154-201ENST00000516193 111 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AP001542.1-201ENST00000591314 200 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 BPIFA4P-203ENST00000603168 689 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC079587.1-201ENST00000603846 277 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 MIR6891-201ENST00000618788 93 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC090506.2-201ENST00000624521 419 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AL158163.1-201ENST00000603915 1649 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC092162.3-201ENST00000624511 1624 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 AC068254.2-201ENST00000623938 3577 ntBASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TM9SF3Q9HD45 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AC087190.4-201ENST00000574616 8334 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 SPRR2C-201ENST00000290702 219 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AL035696.2-201ENST00000407941 709 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 RPL21P43-201ENST00000425440 472 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AL031736.2-201ENST00000426573 787 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 HSFY6P-201ENST00000445573 403 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 OR5H4P-201ENST00000510851 923 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 OR8R1P-201ENST00000543943 764 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AC074029.2-201ENST00000551045 634 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AL121834.1-201ENST00000572284 509 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AC099669.2-201ENST00000616549 437 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AC004825.2-201ENST00000616634 455 ntBASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.37□□□□□ -1.71
TM9SF3Q9HD45 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 MTCO1P14-201ENST00000441695 1559 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 ASNSP1-204ENST00000641977 1664 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 AL161909.1-201ENST00000397390 712 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 NRBF2P2-201ENST00000413087 861 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 AL160175.1-201ENST00000428124 247 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 MED6P1-201ENST00000439659 713 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 RPL34P26-201ENST00000445636 354 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 AC091153.1-201ENST00000466297 402 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 SYT14P1-201ENST00000481459 721 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 RPL35P6-201ENST00000490024 372 ntBASIC4.36□□□□□ -1.71
TM9SF3Q9HD45 AC010374.1-201ENST00000503762 1237 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms