Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC005858.4-201ENST00000623191 700 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 OR2L1P-202ENST00000641567 1023 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 EXOC5P1-201ENST00000510543 1969 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM4Q9C037 AC032011.1-201ENST00000611703 1549 ntBASIC4.25□□□□□ -1.73
TRIM4Q9C037 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM4Q9C037 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM4Q9C037 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 AL592437.2-201ENST00000421655 2434 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 TNPO1P3-201ENST00000436471 2662 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC108467.2-201ENST00000617640 1597 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM4Q9C037 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 MAPK10-372ENST00000641954 3413 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 SNORA63.1-201ENST00000362493 131 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC069157.1-201ENST00000421749 137 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC091390.3-201ENST00000426478 338 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AL365396.1-201ENST00000430854 671 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC006326.1-201ENST00000445465 787 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 RPL23AP43-201ENST00000446445 471 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 RPL5P32-201ENST00000454085 879 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 PPIAP15-201ENST00000479662 484 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 RPS27AP16-201ENST00000492222 470 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC017037.1-201ENST00000508460 471 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 SNORA70.14-201ENST00000516205 110 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 BPIFA4P-203ENST00000603168 689 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 MIR486-1-201ENST00000612171 68 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC022960.2-201ENST00000616300 666 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC091905.2-201ENST00000623143 306 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM4Q9C037 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 ZNF137P-201ENST00000456718 1920 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC139769.1-204ENST00000472297 1931 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM4Q9C037 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM4Q9C037 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM4Q9C037 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM4Q9C037 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM4Q9C037 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM4Q9C037 AC022893.2-201ENST00000564832 3296 ntBASIC4.24□□□□□ -1.73
TRIM4Q9C037 NXPH1-205ENST00000602349 1953 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 RNU1-87P-201ENST00000363727 170 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM4Q9C037 PPIAP31-201ENST00000405422 495 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 FCF1P5-201ENST00000406490 482 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM4Q9C037 AC106901.1-201ENST00000425086 698 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 AC091959.2-201ENST00000477363 321 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 AP003730.1-201ENST00000524605 285 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 RPL23AP97-201ENST00000568955 471 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 AC012468.1-201ENST00000604888 430 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 AL160281.1-201ENST00000605307 311 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 CR382285.2-201ENST00000624662 1495 ntBASIC4.23□□□□□ -1.73
TRIM4Q9C037 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM4Q9C037 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM4Q9C037 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM4Q9C037 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM4Q9C037 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM4Q9C037 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TRIM4Q9C037 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRIM4Q9C037 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM4Q9C037 AL159169.1-201ENST00000421119 127 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 RPS26P47-201ENST00000427219 348 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 AL117339.2-201ENST00000430475 180 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 RPL23AP25-201ENST00000430973 463 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 RPS29P7-201ENST00000439662 171 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 RPL23AP93-201ENST00000440847 484 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 RPL7L1P8-201ENST00000469911 741 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 RN7SL810P-201ENST00000493031 276 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 AC109458.1-201ENST00000508858 316 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms