Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 OR11H4-201ENST00000315409 1082 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 MIR383-201ENST00000362257 73 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 MIR23A-201ENST00000385245 73 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AL445189.1-201ENST00000405722 338 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 HSPE1P12-201ENST00000412576 301 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AL450992.3-201ENST00000413192 568 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 DPY19L1P2-201ENST00000426647 915 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 RPS27AP12-201ENST00000429552 465 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 UBE2V2P3-201ENST00000433562 437 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 RPL23AP46-201ENST00000438548 490 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AF228730.2-201ENST00000438784 848 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AL356535.1-201ENST00000440335 398 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 RPS17P13-201ENST00000448974 407 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC104306.1-201ENST00000449702 371 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 RPL7P1-201ENST00000468161 747 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 RPL7P9-201ENST00000468715 747 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 RN7SL604P-201ENST00000492589 296 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 MIR2116-201ENST00000517221 80 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC090281.1-201ENST00000523019 276 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC135001.1-201ENST00000544546 283 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC025627.2-201ENST00000576220 160 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AL109618.2-201ENST00000605527 211 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC128687.2-201ENST00000609657 566 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AC024941.1-201ENST00000612250 334 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AL392048.1-201ENST00000613946 534 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 OR52H1-202ENST00000641796 1061 ntBASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AC017007.4-201ENST00000503353 1352 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 RNA5SP515-201ENST00000364570 118 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 RNU1-64P-201ENST00000365443 163 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 SNORA70C-201ENST00000384538 135 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 OR6C69P-201ENST00000394268 893 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AL590806.1-201ENST00000415818 853 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 CASP3P1-201ENST00000446037 609 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 MTND2P25-201ENST00000449028 610 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 RPS20P4-201ENST00000461659 355 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 RPL23AP71-201ENST00000470966 469 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 UQCRHP4-201ENST00000471686 272 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 RPS6P4-201ENST00000494693 758 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AC018797.3-201ENST00000513388 1241 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 MRPS35P3-201ENST00000603189 709 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AC023043.4-201ENST00000612081 449 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms