Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CASC19-284ENST00000642142 1868 ntBASIC4.2□□□□□ -1.74
C9orf72Q96LT7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf72Q96LT7 OR11H5P-202ENST00000641612 1325 ntBASIC4.2□□□□□ -1.74
C9orf72Q96LT7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf72Q96LT7 AC007342.7-201ENST00000624610 2337 ntBASIC4.2□□□□□ -1.74
C9orf72Q96LT7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AL049555.1-201ENST00000562834 1933 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 RNU6-1251P-201ENST00000364502 107 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 MIR1193-201ENST00000408109 78 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 RNU6-603P-201ENST00000411403 107 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 RPL23AP38-201ENST00000423801 469 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 SEC63P1-201ENST00000425785 1258 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC114755.5-201ENST00000447760 831 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC021205.1-201ENST00000468797 348 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC069499.1-201ENST00000489433 509 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 RPL35P6-201ENST00000490024 372 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC109458.1-201ENST00000508858 316 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 KRT19P6-201ENST00000510983 209 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AL139286.1-201ENST00000604465 483 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC010857.1-201ENST00000606398 594 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AP000255.1-201ENST00000610276 676 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 CYP1D1P-201ENST00000416662 1433 ntBASIC4.19□□□□□ -1.74
C9orf72Q96LT7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf72Q96LT7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC114546.3-201ENST00000623582 1734 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 Z73965.1-201ENST00000623412 2297 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 ERCC6-202ENST00000374127 1782 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 RNA5SP513-201ENST00000364648 118 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 RNU6-146P-201ENST00000384602 108 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 ZNF603P-201ENST00000405613 487 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC087650.1-201ENST00000431445 468 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 RPL31P20-201ENST00000449593 360 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 RN7SL691P-201ENST00000494487 301 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AL592156.1-201ENST00000508758 304 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC008958.1-201ENST00000511047 682 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC018797.3-201ENST00000513388 1241 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 RNA5SP49-201ENST00000516450 115 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 RNU7-143P-201ENST00000516781 65 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 OR7E10P-201ENST00000526420 991 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 GNRHR2P1-201ENST00000555315 631 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AL360157.1-201ENST00000565962 87 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC027281.1-201ENST00000574178 758 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC022655.2-201ENST00000577280 318 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AL590410.1-201ENST00000617925 333 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC067852.7-201ENST00000623270 535 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AP006248.2-201ENST00000623309 592 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC092159.4-201ENST00000624944 550 ntBASIC4.18□□□□□ -1.74
C9orf72Q96LT7 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf72Q96LT7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
C9orf72Q96LT7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.17□□□□□ -1.74
C9orf72Q96LT7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms