Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 THAP12P5-201ENST00000405864 2275 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 AL672167.1-204ENST00000641875 3017 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 DDX18P5-201ENST00000534547 1306 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.5□□□□□ -1.53
HPS3Q969F9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.5□□□□□ -1.53
HPS3Q969F9 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 DBF4P1-201ENST00000412976 1892 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HPS3Q969F9 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
HPS3Q969F9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.5□□□□□ -1.53
HPS3Q969F9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 RNU5A-2P-201ENST00000384337 116 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 AL133270.1-201ENST00000402635 279 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AC007738.1-201ENST00000413892 348 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.5□□□□□ -1.53
HPS3Q969F9 AC007559.1-201ENST00000428736 355 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.5□□□□□ -1.53
HPS3Q969F9 RPL35AP21-201ENST00000437667 333 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 AC004865.1-201ENST00000442276 1003 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.5□□□□□ -1.53
HPS3Q969F9 AL034418.1-201ENST00000448675 860 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.5□□□□□ -1.53
HPS3Q969F9 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.5□□□□□ -1.53
HPS3Q969F9 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.5□□□□□ -1.53
HPS3Q969F9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.5□□□□□ -1.53
HPS3Q969F9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.5□□□□□ -1.53
HPS3Q969F9 RN7SL591P-201ENST00000496150 292 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AC105313.1-201ENST00000509121 353 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.5□□□□□ -1.53
HPS3Q969F9 AC004217.3-201ENST00000551552 878 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.5□□□□□ -1.53
HPS3Q969F9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.5□□□□□ -1.53
HPS3Q969F9 AC013444.2-201ENST00000603317 787 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AL451074.6-201ENST00000608512 729 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AC023158.2-201ENST00000614876 543 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.5□□□□□ -1.53
HPS3Q969F9 AL022401.1-201ENST00000619498 108 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
HPS3Q969F9 THAP12P4-201ENST00000528321 2266 ntBASIC5.5□□□□□ -1.53
HPS3Q969F9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HPS3Q969F9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.5□□□□□ -1.53
HPS3Q969F9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.49□□□□□ -1.53
HPS3Q969F9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HPS3Q969F9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 Y_RNA.169-201ENST00000363745 96 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 RNU6-157P-201ENST00000383957 107 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 MIR765-201ENST00000390226 114 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AL357515.1-201ENST00000402967 542 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 RAP1BP1-201ENST00000412709 553 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 SETP15-201ENST00000412724 337 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 DDX39BP1-205ENST00000422507 192 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AL139421.1-201ENST00000423010 169 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 MTND1P32-201ENST00000433043 938 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 ATP5F1P1-201ENST00000433775 569 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.49□□□□□ -1.53
HPS3Q969F9 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.49□□□□□ -1.53
HPS3Q969F9 RPL21P134-201ENST00000453468 483 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 ART2BP-201ENST00000453501 499 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 RFC5P1-201ENST00000454419 874 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.49□□□□□ -1.53
HPS3Q969F9 RPL5P24-201ENST00000463742 885 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC006511.1-201ENST00000470614 315 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 WBP1LP4-201ENST00000505043 344 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.49□□□□□ -1.53
HPS3Q969F9 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.49□□□□□ -1.53
HPS3Q969F9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.49□□□□□ -1.53
HPS3Q969F9 MTCYBP16-201ENST00000509187 1129 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC010486.3-201ENST00000511602 785 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC109471.1-201ENST00000511631 612 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC109445.1-201ENST00000512356 383 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.49□□□□□ -1.53
HPS3Q969F9 RN7SKP260-201ENST00000516907 149 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AP001207.1-201ENST00000524051 481 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC022832.1-201ENST00000530718 645 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC005832.3-201ENST00000537929 631 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 HMGN2P6-201ENST00000551091 273 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.49□□□□□ -1.53
HPS3Q969F9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.49□□□□□ -1.53
HPS3Q969F9 AC123786.2-201ENST00000603459 275 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC009220.3-201ENST00000604318 586 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms