Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RTN4IP1Q8WWV3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC083799.1-201ENST00000366451 910 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 CYP1D1P-201ENST00000416662 1433 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 RPL18P10-201ENST00000425606 538 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 DPY19L1P2-201ENST00000426647 915 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 LARP7P4-201ENST00000481075 878 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 RN7SL271P-201ENST00000487601 295 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 MIR2114-201ENST00000516645 80 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC034205.1-201ENST00000520621 638 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC105233.3-201ENST00000531125 744 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC092851.1-201ENST00000535964 478 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 RPL23AP87-202ENST00000573039 466 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC016911.1-201ENST00000613297 452 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC114781.5-201ENST00000615297 108 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC090246.1-201ENST00000616499 426 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC105105.5-201ENST00000622635 1294 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC011944.2-201ENST00000624440 683 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AP000843.1-201ENST00000624880 701 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 AC087565.3-202ENST00000642085 1603 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.4□□□□□ -1.87
RTN4IP1Q8WWV3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC114546.3-201ENST00000623582 1734 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 RN7SKP182-201ENST00000410772 298 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 RPL23AP26-201ENST00000412728 464 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 RPA2P2-201ENST00000419698 796 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 MTCO1P45-201ENST00000431457 267 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 BTF3P10-201ENST00000433415 495 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AL606490.8-201ENST00000441624 319 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC239809.1-201ENST00000450470 217 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC041039.1-201ENST00000485656 536 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AF213884.1-201ENST00000488102 463 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC108475.1-201ENST00000507880 950 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC005798.1-201ENST00000513715 387 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 RNU7-143P-201ENST00000516781 65 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC067904.2-201ENST00000517322 1283 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 C1GALT1P3-201ENST00000522049 819 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 NPM1P35-201ENST00000533043 868 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC012417.1-201ENST00000582307 1039 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 IPO5P1-202ENST00000600039 287 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AL161729.3-201ENST00000603533 673 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AL451044.1-201ENST00000604867 238 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC017076.1-201ENST00000607613 578 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 RMST_5.1-201ENST00000618704 126 ntBASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RTN4IP1Q8WWV3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC092079.1-201ENST00000558620 1985 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms