Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 YWHAQP9-201ENST00000445891 512 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 BTF3P6-201ENST00000448054 499 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 RPL12P20-201ENST00000475538 479 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC068587.2-201ENST00000478386 781 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 RPL23AP44-201ENST00000482216 473 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 ENPP7P9-201ENST00000514456 627 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC022726.1-201ENST00000587475 207 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC243654.2-201ENST00000612843 443 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AL353726.1-201ENST00000614041 1000 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC009464.1-201ENST00000615731 469 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC011330.2-201ENST00000621680 635 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC097655.1-201ENST00000635075 318 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC083843.3-201ENST00000623679 2186 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.45□□□□□ -1.7
BEST3Q8N1M1 TTC39DP-201ENST00000416781 1688 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 AC021242.1-201ENST00000507315 2035 ntBASIC4.45□□□□□ -1.7
BEST3Q8N1M1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 RNU4-28P-201ENST00000364739 141 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 MIR141-201ENST00000384975 95 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 MIR513B-201ENST00000385136 84 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 RN7SKP106-201ENST00000410832 272 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 RPL22P18-201ENST00000417197 377 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC013429.2-201ENST00000418798 781 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 FABP7P1-201ENST00000424004 391 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 RPF2P1-201ENST00000424137 906 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 DYNLL1P7-201ENST00000429273 258 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 PPIAP13-201ENST00000434706 478 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC010326.1-201ENST00000462726 602 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC073073.1-201ENST00000493920 463 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 SCARNA22-201ENST00000503991 125 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 IGBP1P5-201ENST00000507524 1000 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 RAB9BP1-201ENST00000519581 626 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC008562.1-201ENST00000521763 330 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 NIFKP8-201ENST00000560500 874 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 SNORA74C-1-201ENST00000580726 201 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 ELOCP28-201ENST00000590044 317 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 NTAN1P1-201ENST00000603150 646 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 CDRT1-208ENST00000630868 794 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 ZNF663P-202ENST00000641770 1131 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 LINC02211-204ENST00000642024 1070 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 AC027228.2-201ENST00000567141 2154 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 A2MP1-204ENST00000566278 4130 ntBASIC4.44□□□□□ -1.7
BEST3Q8N1M1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BEST3Q8N1M1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms