Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC115285.1-201ENST00000424879 736 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 ELOCP3-201ENST00000439303 348 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 AL354710.1-201ENST00000453641 246 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 RPS29P19-201ENST00000479709 171 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 RN7SL691P-201ENST00000494487 301 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 PRELID3BP5-201ENST00000508612 460 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 AC008958.1-201ENST00000511047 682 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 SNORA70.14-201ENST00000516205 110 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 CYCSP29-201ENST00000533731 318 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 AGGF1P8-201ENST00000562979 1000 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 AL354984.3-201ENST00000604803 325 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 FAM27D1-201ENST00000612308 341 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 OR52H1-202ENST00000641796 1061 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 RPS4XP5-202ENST00000449995 1334 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC28Q86X40 AC005261.4-201ENST00000600047 1385 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC28Q86X40 PHKBP1-201ENST00000450951 1951 ntBASIC3.6□□□□□ -1.83
LRRC28Q86X40 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC28Q86X40 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 XIAPP3-201ENST00000312918 795 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 MIR383-201ENST00000362257 73 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 RNU1-14P-201ENST00000362759 152 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 SNORA70C-201ENST00000384538 135 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 Z98941.1-201ENST00000407764 100 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 RN7SKP235-201ENST00000410662 305 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 MFSD13B-201ENST00000420133 1290 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 RPL23AP38-201ENST00000423801 469 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC092809.1-201ENST00000441469 474 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 CLIC4P1-201ENST00000453177 535 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 RN7SL271P-201ENST00000487601 295 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC093267.1-201ENST00000489176 961 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 IGBP1P5-201ENST00000507524 1000 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC108475.1-201ENST00000507880 950 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 SNORA31.9-201ENST00000516429 84 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 TVP23BP1-201ENST00000557500 617 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AL109741.3-201ENST00000561748 592 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC069366.1-201ENST00000583159 838 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC023043.4-201ENST00000612081 449 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AL731566.2-201ENST00000618971 317 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC016717.3-201ENST00000624730 554 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC008013.2-202ENST00000637965 364 ntBASIC3.59□□□□□ -1.83
LRRC28Q86X40 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC28Q86X40 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LRRC28Q86X40 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.59□□□□□ -1.84
LRRC28Q86X40 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
LRRC28Q86X40 UBE3AP2-201ENST00000429033 2259 ntBASIC3.59□□□□□ -1.84
LRRC28Q86X40 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
LRRC28Q86X40 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LRRC28Q86X40 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.59□□□□□ -1.84
LRRC28Q86X40 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.59□□□□□ -1.84
LRRC28Q86X40 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
LRRC28Q86X40 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC28Q86X40 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
LRRC28Q86X40 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC28Q86X40 RNA5SP36-201ENST00000410197 133 ntBASIC3.58□□□□□ -1.84
LRRC28Q86X40 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC28Q86X40 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC28Q86X40 EIF2S2P3-201ENST00000428356 999 ntBASIC3.58□□□□□ -1.84
LRRC28Q86X40 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC28Q86X40 BMS1P19-201ENST00000433925 393 ntBASIC3.58□□□□□ -1.84
LRRC28Q86X40 AC009263.1-201ENST00000441193 1239 ntBASIC3.58□□□□□ -1.84
LRRC28Q86X40 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.58□□□□□ -1.84
LRRC28Q86X40 NIPA2P2-201ENST00000496376 1083 ntBASIC3.58□□□□□ -1.84
LRRC28Q86X40 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC28Q86X40 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC28Q86X40 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC28Q86X40 AC026726.1-201ENST00000512859 601 ntBASIC3.58□□□□□ -1.84
LRRC28Q86X40 RN7SKP5-201ENST00000517045 272 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms