Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC009229.4-201ENST00000623854 1947 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 FCF1P5-201ENST00000406490 482 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AL590084.1-201ENST00000407885 387 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 TBCAP2-201ENST00000416175 326 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 Z75741.2-201ENST00000417272 1167 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC011753.3-201ENST00000443436 406 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 NPM1P13-201ENST00000452663 865 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC010469.1-201ENST00000463864 576 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 RPL7P39-201ENST00000481157 744 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 MTND2P14-201ENST00000482139 351 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 RN7SL214P-201ENST00000487317 265 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC118282.2-201ENST00000508739 374 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 BX510359.5-201ENST00000515651 304 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC008694.2-201ENST00000517591 306 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC125612.1-201ENST00000547580 377 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC011445.2-201ENST00000599274 173 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AL133507.1-201ENST00000605269 557 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC090525.3-201ENST00000605601 189 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AL022401.1-201ENST00000619498 108 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC131159.1-201ENST00000621854 213 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 ZNF663P-202ENST00000641770 1131 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC138393.1-206ENST00000540997 1886 ntBASIC4.86□□□□□ -1.63
LRIG3Q6UXM1 AC009313.2-201ENST00000417893 1941 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 MIR448-201ENST00000362131 111 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 RNA5SP52-201ENST00000362448 134 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 RNA5SP183-201ENST00000362452 119 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 RNA5SP435-201ENST00000364044 108 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 RNU1-43P-201ENST00000365052 165 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 RNU6-549P-201ENST00000384433 107 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 ERHP2-201ENST00000402323 299 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 SNORA11.3-201ENST00000408471 128 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 AL357520.1-201ENST00000441557 453 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 EXTL2P1-201ENST00000446218 416 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 AURKAPS1-201ENST00000451805 1212 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 NECAP1P2-201ENST00000455668 727 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 RPL7P48-201ENST00000461513 746 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 RPS3AP22-201ENST00000488297 769 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 RN7SL101P-201ENST00000496350 279 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 OR51K1P-201ENST00000510214 950 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 PPBPP1-201ENST00000510807 373 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 MTCO3P28-201ENST00000513351 515 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 IGLV3-26-201ENST00000520756 302 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 NPM1P6-201ENST00000521088 871 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 AC087373.1-201ENST00000524920 491 ntBASIC4.85□□□□□ -1.63
LRIG3Q6UXM1 MTND2P26-201ENST00000528255 1029 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms