Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 DCAF13P3-201ENST00000561147 1334 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC063976.2-201ENST00000425667 3556 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AL391994.1-201ENST00000254724 282 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 NAP1L4P1-201ENST00000319092 1157 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 EI24P3-201ENST00000399046 1062 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AL589647.1-201ENST00000402485 466 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AL035079.1-201ENST00000405210 287 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC093162.1-201ENST00000419682 124 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 GNG5P5-201ENST00000420444 220 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC019178.2-201ENST00000423595 505 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC098826.1-201ENST00000433943 471 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 PSMD10P3-201ENST00000437000 448 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC005229.2-201ENST00000456995 399 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC245028.2-201ENST00000458673 253 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC021660.1-201ENST00000465006 554 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 RPL30P6-201ENST00000475925 342 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 OR2A20P-203ENST00000498397 1268 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC048346.1-201ENST00000510247 144 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC110775.1-201ENST00000513721 462 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 EIF4A2P5-201ENST00000529914 499 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC004217.3-201ENST00000551552 878 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC009852.2-201ENST00000567898 485 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC127024.5-201ENST00000580085 462 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AL163642.2-201ENST00000604722 1019 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AP002799.1-201ENST00000623552 423 ntBASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD3Q3KNS1 AC004817.4-201ENST00000602396 3625 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AC109315.1-201ENST00000584143 1347 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 RNA5SP305-201ENST00000362665 119 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 RNU6-1300P-201ENST00000391046 108 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 RN7SKP125-201ENST00000410481 302 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AL590762.4-201ENST00000425885 253 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 DYNLL1P7-201ENST00000429273 258 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 COX6CP18-201ENST00000448769 222 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AC009961.3-201ENST00000449832 765 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 RPS27AP8-201ENST00000452665 445 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AL645937.3-201ENST00000453647 936 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 RPL37P3-201ENST00000456825 293 ntBASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD3Q3KNS1 AC117532.1-201ENST00000514638 323 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms