Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 RNU6-225P-201ENST00000384613 103 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 MIR433-201ENST00000384837 93 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 RPL12P9-201ENST00000412942 488 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 SNRPFP1-201ENST00000414761 252 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 MTCO2P5-201ENST00000422621 426 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC245884.2-201ENST00000426257 404 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 OR4F13P-201ENST00000428478 931 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC010881.1-201ENST00000433830 235 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 AC079922.1-201ENST00000443291 359 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 RPS18P1-201ENST00000447840 458 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 AC063943.1-201ENST00000465434 453 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 RN7SL369P-201ENST00000477138 299 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC096576.1-201ENST00000489014 359 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 RPSAP51-201ENST00000497462 645 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 TMEM251P1-201ENST00000503717 318 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 RNU6-488P-201ENST00000515918 99 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 SNORA74.1-201ENST00000516320 180 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 RNU6-201P-201ENST00000517100 61 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDH1Q08174 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PCDH1Q08174 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDH1Q08174 HSPE1P3-201ENST00000559254 309 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 AC009117.1-201ENST00000563948 554 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDH1Q08174 AC099489.2-201ENST00000574976 260 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDH1Q08174 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 MIR3671-201ENST00000580455 88 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC090312.1-201ENST00000580637 348 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC008687.2-201ENST00000597865 520 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 DISC2.1-201ENST00000612827 205 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH1Q08174 MIR6813-201ENST00000621638 56 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC005858.4-201ENST00000623191 700 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 AC007603.3-201ENST00000636915 979 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 AC010149.2-201ENST00000637608 315 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 MIR1302-1-201ENST00000637932 143 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 SHQ1P1-201ENST00000437111 1544 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 AC096921.2-201ENST00000561507 1916 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 MRE11P1-201ENST00000464884 2127 ntBASIC6.07□□□□□ -1.44
PCDH1Q08174 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH1Q08174 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDH1Q08174 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDH1Q08174 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 Y_RNA.67-201ENST00000362870 100 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 RNU6-359P-201ENST00000365466 108 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 RNU6-456P-201ENST00000384493 107 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AC068050.1-201ENST00000394891 380 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AL122016.1-201ENST00000403365 367 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AL133260.1-201ENST00000405720 405 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 RNA5SP198-201ENST00000410376 127 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC234782.4-201ENST00000417646 1048 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 RPS17P17-201ENST00000419392 409 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 Z82198.3-201ENST00000421145 199 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 RPS7P14-201ENST00000426405 583 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC018644.1-201ENST00000429934 551 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PCDH1Q08174 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC092601.1-201ENST00000444526 383 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms