Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GABPB1Q06547 MTCO1P14-201ENST00000441695 1559 ntBASIC4.36□□□□□ -1.71
GABPB1Q06547 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
GABPB1Q06547 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GABPB1Q06547 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GABPB1Q06547 AL442639.1-201ENST00000625030 1899 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.35□□□□□ -1.71
GABPB1Q06547 SNORA67-201ENST00000384423 137 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPB1Q06547 MTCO3P31-201ENST00000405526 789 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 OR3A2-201ENST00000408891 1076 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GABPB1Q06547 MTCO3P4-201ENST00000419236 787 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPB1Q06547 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPB1Q06547 NPM1P34-201ENST00000428821 893 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPB1Q06547 BTBD7P2-201ENST00000441962 620 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 AC012671.1-201ENST00000451912 203 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 RPL7P45-201ENST00000455851 743 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 AP000893.1-201ENST00000474462 794 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.35□□□□□ -1.71
GABPB1Q06547 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GABPB1Q06547 RPS23P1-201ENST00000491662 432 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 AC104164.2-201ENST00000496953 495 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.35□□□□□ -1.71
GABPB1Q06547 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GABPB1Q06547 SNORA31.13-201ENST00000516624 135 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 OR4A46P-201ENST00000527255 933 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.35□□□□□ -1.71
GABPB1Q06547 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPB1Q06547 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.35□□□□□ -1.71
GABPB1Q06547 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GABPB1Q06547 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPB1Q06547 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
GABPB1Q06547 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.35□□□□□ -1.71
GABPB1Q06547 AL592436.1-201ENST00000605135 558 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 AC135178.6-201ENST00000605314 398 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 AC103710.3-201ENST00000608157 948 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.35□□□□□ -1.71
GABPB1Q06547 CR392039.4-201ENST00000624968 501 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GABPB1Q06547 MTND4P21-201ENST00000453886 1357 ntBASIC4.35□□□□□ -1.71
GABPB1Q06547 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.35□□□□□ -1.71
GABPB1Q06547 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GABPB1Q06547 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPB1Q06547 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.34□□□□□ -1.71
GABPB1Q06547 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GABPB1Q06547 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
GABPB1Q06547 U1.1-201ENST00000384101 164 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 HMGB1P10-201ENST00000395823 563 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 HMGB1P13-201ENST00000406019 642 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AL353692.2-201ENST00000407054 335 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPB1Q06547 RPL21P109-201ENST00000422213 475 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPB1Q06547 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPB1Q06547 AC012075.1-201ENST00000436549 580 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPB1Q06547 UBE2V1P3-201ENST00000439651 417 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 MTCO3P43-201ENST00000440974 771 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AL513321.1-201ENST00000441175 761 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPB1Q06547 AL137845.2-201ENST00000444292 988 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPB1Q06547 RPS27AP2-201ENST00000457576 465 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AC010468.1-201ENST00000461022 817 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 RPS20P4-201ENST00000461659 355 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AC009127.1-201ENST00000467090 155 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 RPL35AP19-201ENST00000469425 329 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 RN7SL330P-201ENST00000469709 307 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 RN7SL244P-201ENST00000493405 297 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AC010374.1-201ENST00000503762 1237 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
GABPB1Q06547 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GABPB1Q06547 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPB1Q06547 AC103833.1-201ENST00000517442 172 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 IGKV1-32-201ENST00000519290 311 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AC126177.5-201ENST00000549599 178 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.34□□□□□ -1.71
GABPB1Q06547 POLR2KP1-201ENST00000553226 168 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 OR4U1P-201ENST00000554958 912 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 GNRHR2P1-201ENST00000555315 631 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPB1Q06547 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPB1Q06547 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPB1Q06547 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.34□□□□□ -1.71
GABPB1Q06547 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.34□□□□□ -1.71
GABPB1Q06547 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.34□□□□□ -1.71
GABPB1Q06547 OR4H6P-202ENST00000603819 340 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPB1Q06547 MTND4P31-201ENST00000425607 1343 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 AL353743.4-201ENST00000422653 1547 ntBASIC4.34□□□□□ -1.71
GABPB1Q06547 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
GABPB1Q06547 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.34□□□□□ -1.71
GABPB1Q06547 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GABPB1Q06547 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GABPB1Q06547 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GABPB1Q06547 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms