Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKDCP78527 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC2.66□□□□□ -1.98
PRKDCP78527 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKDCP78527 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKDCP78527 AC007599.1-201ENST00000568688 1174 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.66□□□□□ -1.98
PRKDCP78527 MIR4276-201ENST00000584832 70 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 AL162274.2-201ENST00000614406 332 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 AC124312.6-202ENST00000623624 418 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC2.66□□□□□ -1.98
PRKDCP78527 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC2.66□□□□□ -1.98
PRKDCP78527 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PRKDCP78527 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC2.66□□□□□ -1.98
PRKDCP78527 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 AC090337.1-201ENST00000579651 2074 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 AC003685.2-201ENST00000422795 395 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKDCP78527 AC008802.1-201ENST00000519121 791 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKDCP78527 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKDCP78527 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
PRKDCP78527 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.66□□□□□ -1.98
PRKDCP78527 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC2.66□□□□□ -1.98
PRKDCP78527 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PRKDCP78527 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PRKDCP78527 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKDCP78527 FTH1P1-201ENST00000437933 532 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 RPS27AP15-201ENST00000447672 466 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 AC010374.2-201ENST00000512933 535 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 AL121594.4-201ENST00000556211 1196 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 AL137790.1-201ENST00000634283 177 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PRKDCP78527 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
PRKDCP78527 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
PRKDCP78527 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
PRKDCP78527 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.65□□□□□ -1.98
PRKDCP78527 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.65□□□□□ -1.98
PRKDCP78527 AC093815.1-201ENST00000508637 280 ntBASIC2.65□□□□□ -1.98
PRKDCP78527 MIR4319-201ENST00000577285 85 ntBASIC2.65□□□□□ -1.98
PRKDCP78527 LARP7P3-201ENST00000579888 337 ntBASIC2.65□□□□□ -1.98
PRKDCP78527 AP003392.5-201ENST00000607857 415 ntBASIC2.65□□□□□ -1.98
PRKDCP78527 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
PRKDCP78527 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PRKDCP78527 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.65□□□□□ -1.99
PRKDCP78527 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PRKDCP78527 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
PRKDCP78527 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
PRKDCP78527 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PRKDCP78527 RN7SKP186-201ENST00000365371 303 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 RPL21P112-201ENST00000434403 463 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKDCP78527 AC108938.1-201ENST00000451204 136 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 SLC31A1P1-201ENST00000451221 567 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 RPS20P32-201ENST00000456044 356 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.65□□□□□ -1.99
PRKDCP78527 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.65□□□□□ -1.99
PRKDCP78527 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PRKDCP78527 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PRKDCP78527 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKDCP78527 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
PRKDCP78527 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PRKDCP78527 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC2.65□□□□□ -1.99
PRKDCP78527 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKDCP78527 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKDCP78527 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PRKDCP78527 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC2.65□□□□□ -1.99
PRKDCP78527 AL022393.1-201ENST00000625142 1677 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PRKDCP78527 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PRKDCP78527 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PRKDCP78527 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKDCP78527 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKDCP78527 AC132942.1-201ENST00000486753 483 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 OR2A20P-203ENST00000498397 1268 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.65□□□□□ -1.99
PRKDCP78527 AC008885.1-201ENST00000514930 301 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 NELL2-211ENST00000548826 559 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKDCP78527 AC022968.1-201ENST00000567372 442 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKDCP78527 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
PRKDCP78527 AP002001.2-201ENST00000529025 1469 ntBASIC2.65□□□□□ -1.99
PRKDCP78527 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.64□□□□□ -1.99
PRKDCP78527 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.64□□□□□ -1.99
PRKDCP78527 AL451142.2-201ENST00000429076 2090 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PRKDCP78527 OR5J1P-201ENST00000313544 939 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 MIR422A-201ENST00000362286 90 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 RPS4XP8-201ENST00000402039 771 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC2.64□□□□□ -1.99
PRKDCP78527 SRIP2-201ENST00000428470 166 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms