Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC108479.2-201ENST00000617314 601 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC136475.10-201ENST00000620253 385 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC129778.1-202ENST00000623812 261 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC018628.1-201ENST00000624147 3819 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.63□□□□□ -1.51
YBX1P67809 AL591379.1-207ENST00000635982 261 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.63□□□□□ -1.51
YBX1P67809 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 GTF2H2B-203ENST00000508065 1432 ntBASIC5.63□□□□□ -1.51
YBX1P67809 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
YBX1P67809 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.62□□□□□ -1.51
YBX1P67809 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 AC104964.3-201ENST00000606115 2860 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AC007842.1-201ENST00000597336 2039 ntBASIC5.62□□□□□ -1.51
YBX1P67809 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.62□□□□□ -1.51
YBX1P67809 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.62□□□□□ -1.51
YBX1P67809 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.62□□□□□ -1.51
YBX1P67809 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 OR52B3P-201ENST00000314715 928 ntBASIC5.62□□□□□ -1.51
YBX1P67809 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 RNU6-729P-201ENST00000384399 107 ntBASIC5.62□□□□□ -1.51
YBX1P67809 Y_RNA.529-201ENST00000384586 119 ntBASIC5.62□□□□□ -1.51
YBX1P67809 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
YBX1P67809 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.62□□□□□ -1.51
YBX1P67809 HMGN1P20-201ENST00000411849 300 ntBASIC5.62□□□□□ -1.51
YBX1P67809 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.62□□□□□ -1.51
YBX1P67809 AL354868.1-201ENST00000417077 482 ntBASIC5.62□□□□□ -1.51
YBX1P67809 RPS27AP14-201ENST00000422868 454 ntBASIC5.62□□□□□ -1.51
YBX1P67809 SETP9-201ENST00000423837 832 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.62□□□□□ -1.51
YBX1P67809 MRPS21P3-201ENST00000436696 262 ntBASIC5.62□□□□□ -1.51
YBX1P67809 LDHAP2-201ENST00000437325 985 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.62□□□□□ -1.51
YBX1P67809 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.62□□□□□ -1.51
YBX1P67809 AC073109.1-201ENST00000445066 978 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AL161722.1-201ENST00000446972 1032 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.62□□□□□ -1.51
YBX1P67809 AP006222.1-205ENST00000450734 457 ntBASIC5.62□□□□□ -1.51
YBX1P67809 OR6K1P-201ENST00000456766 971 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AC092757.1-201ENST00000467293 467 ntBASIC5.62□□□□□ -1.51
YBX1P67809 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.62□□□□□ -1.51
YBX1P67809 RN7SL174P-201ENST00000475578 289 ntBASIC5.62□□□□□ -1.51
YBX1P67809 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.62□□□□□ -1.51
YBX1P67809 AC104687.1-201ENST00000485829 412 ntBASIC5.62□□□□□ -1.51
YBX1P67809 OR5M14P-201ENST00000506803 618 ntBASIC5.62□□□□□ -1.51
YBX1P67809 MTCO3P9-201ENST00000506989 781 ntBASIC5.62□□□□□ -1.51
YBX1P67809 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 AC139365.2-201ENST00000517972 253 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AP001189.2-201ENST00000527320 189 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.62□□□□□ -1.51
YBX1P67809 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.62□□□□□ -1.51
YBX1P67809 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.62□□□□□ -1.51
YBX1P67809 MIR4433B-201ENST00000581329 102 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.62□□□□□ -1.51
YBX1P67809 AC073091.2-201ENST00000603205 907 ntBASIC5.62□□□□□ -1.51
YBX1P67809 YWHAQP7-201ENST00000603536 658 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AC091488.1-201ENST00000604239 660 ntBASIC5.62□□□□□ -1.51
YBX1P67809 RNU6-88P-201ENST00000606801 100 ntBASIC5.62□□□□□ -1.51
YBX1P67809 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.62□□□□□ -1.51
YBX1P67809 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.62□□□□□ -1.51
YBX1P67809 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.62□□□□□ -1.51
YBX1P67809 AC093591.3-201ENST00000634516 308 ntBASIC5.62□□□□□ -1.51
YBX1P67809 AC079776.5-201ENST00000641920 211 ntBASIC5.62□□□□□ -1.51
YBX1P67809 OR5BR1P-201ENST00000524992 1330 ntBASIC5.62□□□□□ -1.51
YBX1P67809 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
YBX1P67809 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.62□□□□□ -1.51
YBX1P67809 ZNF733P-202ENST00000444809 1573 ntBASIC5.62□□□□□ -1.51
YBX1P67809 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
YBX1P67809 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.62□□□□□ -1.51
YBX1P67809 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 AC117529.2-201ENST00000512159 2068 ntBASIC5.62□□□□□ -1.51
YBX1P67809 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
YBX1P67809 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
YBX1P67809 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
YBX1P67809 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
YBX1P67809 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
YBX1P67809 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
YBX1P67809 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.61□□□□□ -1.51
YBX1P67809 MT-TP-201ENST00000387461 68 ntBASIC5.61□□□□□ -1.51
YBX1P67809 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
YBX1P67809 RPL23AP29-201ENST00000397284 453 ntBASIC5.61□□□□□ -1.51
YBX1P67809 ADAM24P-201ENST00000398655 2101 ntBASIC5.61□□□□□ -1.51
YBX1P67809 RNU4-55P-201ENST00000410731 137 ntBASIC5.61□□□□□ -1.51
YBX1P67809 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 AL357752.1-201ENST00000412817 349 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms