Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SNORA70.6-201ENST00000383934 134 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CLRN1P58418 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 HMGB1P11-201ENST00000413899 637 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 RIMKLBP2-201ENST00000424737 654 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AKR1B10P1-201ENST00000425765 942 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 HSPD1P12-201ENST00000429127 1069 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC005297.1-201ENST00000444765 862 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AL450996.1-201ENST00000445574 1202 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AL596266.1-201ENST00000448132 400 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 RPS15AP1-201ENST00000457423 391 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 MTAPP1-201ENST00000489154 819 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC005912.1-201ENST00000495392 255 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AC090638.1-201ENST00000498296 909 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLRN1P58418 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 NPM1P6-201ENST00000521088 871 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 DPPA2P4-201ENST00000563717 878 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC091489.2-201ENST00000566263 604 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.96□□□□□ -1.62
CLRN1P58418 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC008687.2-201ENST00000597865 520 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 AL606834.2-201ENST00000602954 668 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AC115286.1-201ENST00000604298 434 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AP001521.1-201ENST00000609150 300 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 AP005431.1-201ENST00000618479 319 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 SRRM1P3-201ENST00000426911 2678 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLRN1P58418 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLRN1P58418 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CLRN1P58418 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLRN1P58418 AC025125.1-201ENST00000624743 1922 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 AC087516.1-201ENST00000561236 2428 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLRN1P58418 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.95□□□□□ -1.62
CLRN1P58418 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLRN1P58418 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLRN1P58418 AC079097.1-201ENST00000512187 1399 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 AC123769.1-201ENST00000530992 3192 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 AC020633.1-201ENST00000468439 2247 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLRN1P58418 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLRN1P58418 SNRPEP3-201ENST00000338402 276 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 RNY4P24-201ENST00000362735 96 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 RNA5SP510-201ENST00000364697 99 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLRN1P58418 SNORD56.6-201ENST00000384569 71 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 MIR551A-201ENST00000385042 96 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLRN1P58418 U3.23-201ENST00000391132 200 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 AC109780.2-201ENST00000413467 845 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 AL133482.1-201ENST00000415988 498 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 RPL34P3-201ENST00000421454 338 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 AC233981.1-201ENST00000423224 461 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.95□□□□□ -1.62
CLRN1P58418 BX276092.6-201ENST00000430476 250 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.95□□□□□ -1.62
CLRN1P58418 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.95□□□□□ -1.62
CLRN1P58418 RPL7P31-201ENST00000450192 724 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 RPL23AP15-201ENST00000450202 459 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 AL672138.1-201ENST00000450604 1015 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 OR52E7P-201ENST00000452394 933 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 BX276092.8-201ENST00000455722 250 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.95□□□□□ -1.62
CLRN1P58418 TMED11P-201ENST00000479478 690 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 EIF3KP3-201ENST00000514461 639 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 SNORA43.3-201ENST00000517240 103 ntBASIC4.95□□□□□ -1.62
CLRN1P58418 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.95□□□□□ -1.62
CLRN1P58418 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms