Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RPS4XP6-201ENST00000477670 797 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.92□□□□□ -1.62
HDAC4P56524 TCP11X3P-202ENST00000514289 1254 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 RN7SKP276-201ENST00000516242 268 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.92□□□□□ -1.62
HDAC4P56524 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.92□□□□□ -1.62
HDAC4P56524 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.92□□□□□ -1.62
HDAC4P56524 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.92□□□□□ -1.62
HDAC4P56524 AC027104.1-201ENST00000563702 681 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 MIR4330-201ENST00000579077 105 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AC090312.1-201ENST00000580637 348 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HDAC4P56524 RPP40P2-201ENST00000603596 712 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AL445435.1-201ENST00000604232 665 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 FAM25E-202ENST00000608562 189 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AC097505.1-201ENST00000610199 565 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 STMN1P1-201ENST00000617809 440 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AL356863.1-201ENST00000623378 1080 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HDAC4P56524 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HDAC4P56524 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HDAC4P56524 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HDAC4P56524 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.92□□□□□ -1.62
HDAC4P56524 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 ZFRP1-201ENST00000457579 2970 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HDAC4P56524 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HDAC4P56524 RNF6P1-201ENST00000444889 1784 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HDAC4P56524 AC090971.4-201ENST00000560291 1800 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.91□□□□□ -1.62
HDAC4P56524 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.91□□□□□ -1.62
HDAC4P56524 AC011155.1-201ENST00000316512 456 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 RNA5SP28-201ENST00000363841 119 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HDAC4P56524 RNA5SP87-201ENST00000384155 118 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 RNU6-146P-201ENST00000384602 108 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AL590290.1-201ENST00000405336 380 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 ZNF602P-201ENST00000405929 924 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HDAC4P56524 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.91□□□□□ -1.62
HDAC4P56524 FABP7P1-201ENST00000424004 391 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.91□□□□□ -1.62
HDAC4P56524 HMGB3P5-201ENST00000428894 612 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 RPL12P28-201ENST00000430852 489 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.91□□□□□ -1.62
HDAC4P56524 MTND1P26-201ENST00000440488 538 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 ARL5AP2-201ENST00000444698 533 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AC104651.2-201ENST00000447549 528 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.91□□□□□ -1.62
HDAC4P56524 AC092324.1-201ENST00000468671 324 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AC105233.1-201ENST00000498840 781 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.91□□□□□ -1.62
HDAC4P56524 PGBD4P4-201ENST00000509673 613 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.91□□□□□ -1.62
HDAC4P56524 AC093752.1-206ENST00000511823 336 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.91□□□□□ -1.62
HDAC4P56524 POLR2KP1-201ENST00000553226 168 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 UBE2FP2-201ENST00000566646 462 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.91□□□□□ -1.62
HDAC4P56524 MIR4480-201ENST00000582492 71 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AC243654.2-201ENST00000612843 443 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 U6.48-201ENST00000618523 106 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.91□□□□□ -1.62
HDAC4P56524 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.91□□□□□ -1.62
HDAC4P56524 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.91□□□□□ -1.62
HDAC4P56524 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HDAC4P56524 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HDAC4P56524 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HDAC4P56524 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HDAC4P56524 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HDAC4P56524 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HDAC4P56524 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HDAC4P56524 AL672167.1-205ENST00000641112 3080 ntBASIC4.91□□□□□ -1.62
HDAC4P56524 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HDAC4P56524 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HDAC4P56524 AC007390.2-201ENST00000606229 3803 ntBASIC4.9□□□□□ -1.62
HDAC4P56524 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HDAC4P56524 AL031119.1-201ENST00000404707 1879 ntBASIC4.9□□□□□ -1.62
HDAC4P56524 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HDAC4P56524 AC027290.2-201ENST00000623210 18662 ntBASIC4.9□□□□□ -1.62
HDAC4P56524 ASNSP1-201ENST00000518311 1939 ntBASIC4.9□□□□□ -1.62
HDAC4P56524 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HDAC4P56524 KPNA2P2-201ENST00000419546 1489 ntBASIC4.9□□□□□ -1.62
HDAC4P56524 AC012618.3-205ENST00000637896 1496 ntBASIC4.9□□□□□ -1.62
HDAC4P56524 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.9□□□□□ -1.62
HDAC4P56524 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HDAC4P56524 RNU6-98P-201ENST00000384173 107 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDAC4P56524 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HDAC4P56524 RPL7P27-201ENST00000403775 720 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.9□□□□□ -1.63
HDAC4P56524 AC092638.1-201ENST00000411966 1275 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms