Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC092393.1-201ENST00000439625 742 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 RPS26P2-201ENST00000440331 348 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC104306.1-201ENST00000449702 371 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC093166.2-201ENST00000455969 1017 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 RPL35AP28-201ENST00000459730 331 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 AC092754.1-201ENST00000472975 479 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 RPSAP50-201ENST00000481955 852 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 AC114322.1-201ENST00000506771 926 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 PGAM1P13-201ENST00000507497 754 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 AC090071.1-201ENST00000507713 644 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 STMN1P2-201ENST00000508435 439 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 AC113347.3-201ENST00000509113 148 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.79□□□□□ -1.64
NR1H2P55055 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.79□□□□□ -1.64
NR1H2P55055 EEF1A1P37-201ENST00000522748 715 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 HMGB1P40-201ENST00000525121 540 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.79□□□□□ -1.64
NR1H2P55055 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC074051.3-201ENST00000570238 358 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 MIR4458-201ENST00000578872 75 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.79□□□□□ -1.64
NR1H2P55055 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC000068.2-201ENST00000608816 460 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.79□□□□□ -1.64
NR1H2P55055 AC006386.1-201ENST00000619436 415 ntBASIC4.79□□□□□ -1.64
NR1H2P55055 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NR1H2P55055 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NR1H2P55055 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NR1H2P55055 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.79□□□□□ -1.64
NR1H2P55055 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.79□□□□□ -1.64
NR1H2P55055 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.79□□□□□ -1.64
NR1H2P55055 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NR1H2P55055 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.79□□□□□ -1.64
NR1H2P55055 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NR1H2P55055 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.78□□□□□ -1.64
NR1H2P55055 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 AC108751.5-201ENST00000492880 1336 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
NR1H2P55055 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
NR1H2P55055 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NR1H2P55055 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 RNA5SP335-201ENST00000363817 110 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 RNU6-115P-201ENST00000364310 107 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.78□□□□□ -1.64
NR1H2P55055 RNU6-1293P-201ENST00000384077 107 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 SNORA67-201ENST00000384423 137 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NR1H2P55055 AL139098.1-201ENST00000407291 389 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.78□□□□□ -1.64
NR1H2P55055 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.78□□□□□ -1.64
NR1H2P55055 RPL23AP27-201ENST00000415161 451 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AC004690.1-201ENST00000418216 328 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.78□□□□□ -1.64
NR1H2P55055 FABP7P1-201ENST00000424004 391 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 CKS1BP6-201ENST00000424932 240 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 C1DP1-201ENST00000426049 402 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.78□□□□□ -1.64
NR1H2P55055 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 AC009238.2-201ENST00000431026 355 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 NMNAT1P2-201ENST00000435192 860 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 HMGB1P16-201ENST00000447155 540 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 FAR2P1-206ENST00000449736 709 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 RPS6P2-201ENST00000454208 705 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 snoU13.7-201ENST00000459220 104 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 RN7SL329P-201ENST00000467740 299 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NR1H2P55055 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
NR1H2P55055 MTCO3P35-201ENST00000485582 781 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AC134050.1-201ENST00000495088 933 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 DYNLL1P6-201ENST00000503440 264 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 BOLA3P3-201ENST00000505182 232 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.78□□□□□ -1.64
NR1H2P55055 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.78□□□□□ -1.64
NR1H2P55055 RNU6-311P-201ENST00000516224 102 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms