Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SRP9P49458 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP9P49458 AC007342.7-201ENST00000624610 2337 ntBASIC3.6□□□□□ -1.83
SRP9P49458 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP9P49458 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SRP9P49458 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SRP9P49458 MIR423-201ENST00000362201 94 ntBASIC3.6□□□□□ -1.83
SRP9P49458 SNORA62-201ENST00000365493 153 ntBASIC3.6□□□□□ -1.83
SRP9P49458 Y_RNA.625-201ENST00000411256 107 ntBASIC3.6□□□□□ -1.83
SRP9P49458 NRBF2P2-201ENST00000413087 861 ntBASIC3.6□□□□□ -1.83
SRP9P49458 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.6□□□□□ -1.83
SRP9P49458 PTP4A1P5-201ENST00000420305 455 ntBASIC3.6□□□□□ -1.83
SRP9P49458 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP9P49458 HMGB1P32-201ENST00000425971 565 ntBASIC3.6□□□□□ -1.83
SRP9P49458 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP9P49458 C4BPAP2-201ENST00000428434 478 ntBASIC3.6□□□□□ -1.83
SRP9P49458 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP9P49458 AL162151.2-201ENST00000448875 158 ntBASIC3.6□□□□□ -1.83
SRP9P49458 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP9P49458 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP9P49458 RAD23BP3-201ENST00000454157 1152 ntBASIC3.6□□□□□ -1.83
SRP9P49458 RPS23P7-201ENST00000466210 444 ntBASIC3.6□□□□□ -1.83
SRP9P49458 AC007537.2-201ENST00000472093 511 ntBASIC3.6□□□□□ -1.83
SRP9P49458 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP9P49458 AC091167.1-201ENST00000492017 396 ntBASIC3.6□□□□□ -1.83
SRP9P49458 AC108475.1-201ENST00000507880 950 ntBASIC3.6□□□□□ -1.83
SRP9P49458 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.6□□□□□ -1.83
SRP9P49458 SMARCE1P4-201ENST00000523647 241 ntBASIC3.6□□□□□ -1.83
SRP9P49458 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.6□□□□□ -1.83
SRP9P49458 TRAV8-5-201ENST00000537369 341 ntBASIC3.6□□□□□ -1.83
SRP9P49458 AC063950.1-201ENST00000552036 308 ntBASIC3.6□□□□□ -1.83
SRP9P49458 ARF4P1-201ENST00000605447 541 ntBASIC3.6□□□□□ -1.83
SRP9P49458 AC005261.4-201ENST00000600047 1385 ntBASIC3.6□□□□□ -1.83
SRP9P49458 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP9P49458 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SRP9P49458 MAPK10-372ENST00000641954 3413 ntBASIC3.6□□□□□ -1.83
SRP9P49458 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SRP9P49458 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRP9P49458 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP9P49458 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP9P49458 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SRP9P49458 NCAPGP1-201ENST00000505112 1814 ntBASIC3.59□□□□□ -1.83
SRP9P49458 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRP9P49458 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SRP9P49458 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SRP9P49458 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP9P49458 RNU6-328P-201ENST00000390887 106 ntBASIC3.59□□□□□ -1.83
SRP9P49458 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SRP9P49458 AL589994.1-201ENST00000404962 340 ntBASIC3.59□□□□□ -1.83
SRP9P49458 RN7SKP182-201ENST00000410772 298 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP9P49458 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.59□□□□□ -1.83
SRP9P49458 COX6CP17-201ENST00000421389 185 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP9P49458 AL365396.1-201ENST00000430854 671 ntBASIC3.59□□□□□ -1.83
SRP9P49458 NPM1P48-201ENST00000436002 853 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AL138787.1-202ENST00000437804 898 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AC092013.1-201ENST00000438795 332 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AL353093.1-201ENST00000441292 436 ntBASIC3.59□□□□□ -1.83
SRP9P49458 VN1R25P-201ENST00000443385 738 ntBASIC3.59□□□□□ -1.83
SRP9P49458 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.59□□□□□ -1.83
SRP9P49458 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP9P49458 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP9P49458 VN1R40P-201ENST00000455196 941 ntBASIC3.59□□□□□ -1.83
SRP9P49458 STRADBP1-201ENST00000478954 1281 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AC016687.1-201ENST00000482574 353 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AC105137.1-201ENST00000484355 562 ntBASIC3.59□□□□□ -1.83
SRP9P49458 RN7SL691P-201ENST00000494487 301 ntBASIC3.59□□□□□ -1.83
SRP9P49458 BNIP3P41-201ENST00000503774 571 ntBASIC3.59□□□□□ -1.83
SRP9P49458 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP9P49458 BTF3L4P4-201ENST00000506381 449 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.59□□□□□ -1.83
SRP9P49458 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.59□□□□□ -1.83
SRP9P49458 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.59□□□□□ -1.83
SRP9P49458 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP9P49458 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP9P49458 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SRP9P49458 AL445423.1-201ENST00000609941 536 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AP000255.1-201ENST00000610276 676 ntBASIC3.59□□□□□ -1.83
SRP9P49458 MLECP1-201ENST00000615893 709 ntBASIC3.59□□□□□ -1.83
SRP9P49458 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.59□□□□□ -1.83
SRP9P49458 AL445363.3-201ENST00000623080 671 ntBASIC3.59□□□□□ -1.83
SRP9P49458 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRP9P49458 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP9P49458 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.59□□□□□ -1.84
SRP9P49458 HSPA8P1-201ENST00000425843 1833 ntBASIC3.58□□□□□ -1.84
SRP9P49458 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
SRP9P49458 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.58□□□□□ -1.84
SRP9P49458 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.58□□□□□ -1.84
SRP9P49458 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SRP9P49458 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRP9P49458 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
SRP9P49458 RPL32P3-201ENST00000359025 275 ntBASIC3.58□□□□□ -1.84
SRP9P49458 SNORD6-201ENST00000365444 73 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AL583835.1-201ENST00000399570 407 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AMZ2P2-201ENST00000406819 1057 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AC108032.1-201ENST00000416706 207 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.58□□□□□ -1.84
SRP9P49458 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms