Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 RPS4XP15-201ENST00000489210 795 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 AC020593.1-201ENST00000507399 299 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.83□□□□□ -1.8
GABRA4P48169 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABRA4P48169 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.83□□□□□ -1.8
GABRA4P48169 AC022968.1-201ENST00000567372 442 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 CYP4A43P-201ENST00000568156 121 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 AL121834.1-201ENST00000572284 509 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 OR1AB1P-201ENST00000585564 761 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.83□□□□□ -1.8
GABRA4P48169 AL020997.2-201ENST00000602607 184 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 AC068790.5-201ENST00000602741 355 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 AC015922.4-201ENST00000612568 690 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.83□□□□□ -1.8
GABRA4P48169 AC009452.1-201ENST00000640823 606 ntBASIC3.83□□□□□ -1.8
GABRA4P48169 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.83□□□□□ -1.8
GABRA4P48169 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABRA4P48169 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
GABRA4P48169 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.83□□□□□ -1.8
GABRA4P48169 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.83□□□□□ -1.8
GABRA4P48169 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.83□□□□□ -1.8
GABRA4P48169 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.83□□□□□ -1.8
GABRA4P48169 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABRA4P48169 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
GABRA4P48169 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GABRA4P48169 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
GABRA4P48169 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
GABRA4P48169 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.82□□□□□ -1.8
GABRA4P48169 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.82□□□□□ -1.8
GABRA4P48169 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.82□□□□□ -1.8
GABRA4P48169 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GABRA4P48169 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
GABRA4P48169 SNORD35B-201ENST00000363660 87 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 RNA5SP399-201ENST00000364003 117 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.82□□□□□ -1.8
GABRA4P48169 MIR93-201ENST00000385024 80 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 MIR134-201ENST00000385258 73 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 RNU6-603P-201ENST00000411403 107 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 DYNLL1P7-201ENST00000429273 258 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.82□□□□□ -1.8
GABRA4P48169 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.82□□□□□ -1.8
GABRA4P48169 AL359073.1-201ENST00000448036 403 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 FABP3P2-201ENST00000453169 399 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.82□□□□□ -1.8
GABRA4P48169 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.82□□□□□ -1.8
GABRA4P48169 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.82□□□□□ -1.8
GABRA4P48169 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.82□□□□□ -1.8
GABRA4P48169 AC006499.6-201ENST00000511169 607 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 FTH1P9-201ENST00000513251 355 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 NDUFA5P2-201ENST00000519723 344 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.82□□□□□ -1.8
GABRA4P48169 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.82□□□□□ -1.8
GABRA4P48169 AC069240.1-201ENST00000548774 375 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 AC091516.1-201ENST00000549191 703 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.82□□□□□ -1.8
GABRA4P48169 AGGF1P6-201ENST00000569213 976 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 MTND2P13-201ENST00000577438 1039 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.82□□□□□ -1.8
GABRA4P48169 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.82□□□□□ -1.8
GABRA4P48169 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
GABRA4P48169 AL139395.1-201ENST00000603662 160 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 AC116447.1-201ENST00000613153 453 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 uc_338.32-201ENST00000615087 172 ntBASIC3.82□□□□□ -1.8
GABRA4P48169 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.82□□□□□ -1.8
GABRA4P48169 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.82□□□□□ -1.8
GABRA4P48169 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GABRA4P48169 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GABRA4P48169 AC016588.2-201ENST00000632484 3021 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GABRA4P48169 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
GABRA4P48169 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GABRA4P48169 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GABRA4P48169 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
GABRA4P48169 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.81□□□□□ -1.8
GABRA4P48169 AC095050.2-201ENST00000510748 1458 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
GABRA4P48169 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
GABRA4P48169 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
GABRA4P48169 SNORA62.2-201ENST00000364672 152 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 RNU1-64P-201ENST00000365443 163 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 OR13C3-201ENST00000374781 1108 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GABRA4P48169 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.81□□□□□ -1.8
GABRA4P48169 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.81□□□□□ -1.8
GABRA4P48169 MTND4LP13-201ENST00000425022 298 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.81□□□□□ -1.8
GABRA4P48169 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.81□□□□□ -1.8
GABRA4P48169 MTND6P6-201ENST00000478031 263 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 AC110792.1-201ENST00000491826 472 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.81□□□□□ -1.8
GABRA4P48169 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GABRA4P48169 AC120057.2-201ENST00000571520 271 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 VN1R79P-201ENST00000593540 513 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 SNX6P1-201ENST00000601728 1224 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 AL606490.9-201ENST00000603331 271 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 AL451044.1-201ENST00000604867 238 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 AL592436.1-201ENST00000605135 558 ntBASIC3.81□□□□□ -1.8
GABRA4P48169 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.81□□□□□ -1.8
GABRA4P48169 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GABRA4P48169 PHKBP1-201ENST00000450951 1951 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms