Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.11□□□□□ -1.75
RORAP35398 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
RORAP35398 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.1□□□□□ -1.75
RORAP35398 AC011266.1-201ENST00000624119 3569 ntBASIC4.1□□□□□ -1.75
RORAP35398 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RORAP35398 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RORAP35398 Y_RNA.126-201ENST00000363382 111 ntBASIC4.1□□□□□ -1.75
RORAP35398 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RORAP35398 AC097374.1-203ENST00000400783 485 ntBASIC4.1□□□□□ -1.75
RORAP35398 SNORA11-201ENST00000408789 128 ntBASIC4.1□□□□□ -1.75
RORAP35398 RNA5SP317-201ENST00000410176 116 ntBASIC4.1□□□□□ -1.75
RORAP35398 RN7SKP263-201ENST00000411194 309 ntBASIC4.1□□□□□ -1.75
RORAP35398 RNA5SP311-201ENST00000411290 116 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.1□□□□□ -1.75
RORAP35398 RPL23AP38-201ENST00000423801 469 ntBASIC4.1□□□□□ -1.75
RORAP35398 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.1□□□□□ -1.75
RORAP35398 AL157831.1-201ENST00000426134 473 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.1□□□□□ -1.75
RORAP35398 BTF3P10-201ENST00000433415 495 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.1□□□□□ -1.75
RORAP35398 AL512326.1-201ENST00000443050 721 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.1□□□□□ -1.75
RORAP35398 VN1R48P-201ENST00000448149 1036 ntBASIC4.1□□□□□ -1.75
RORAP35398 AL451050.1-201ENST00000450126 415 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.1□□□□□ -1.75
RORAP35398 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RORAP35398 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.1□□□□□ -1.75
RORAP35398 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.1□□□□□ -1.75
RORAP35398 OR52A4P-203ENST00000498233 1014 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC018797.3-201ENST00000513388 1241 ntBASIC4.1□□□□□ -1.75
RORAP35398 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RORAP35398 RNA5SP315-201ENST00000516340 116 ntBASIC4.1□□□□□ -1.75
RORAP35398 RNA5SP49-201ENST00000516450 115 ntBASIC4.1□□□□□ -1.75
RORAP35398 RNA5SP312-201ENST00000517068 116 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC022790.1-201ENST00000522872 204 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.1□□□□□ -1.75
RORAP35398 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.1□□□□□ -1.75
RORAP35398 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.1□□□□□ -1.75
RORAP35398 AC008759.1-201ENST00000589783 983 ntBASIC4.1□□□□□ -1.75
RORAP35398 AL354984.3-201ENST00000604803 325 ntBASIC4.1□□□□□ -1.75
RORAP35398 AL591034.3-201ENST00000605511 685 ntBASIC4.1□□□□□ -1.75
RORAP35398 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.1□□□□□ -1.75
RORAP35398 AC078899.5-201ENST00000612475 178 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC123768.4-201ENST00000616244 701 ntBASIC4.1□□□□□ -1.75
RORAP35398 AC139769.3-201ENST00000618383 175 ntBASIC4.1□□□□□ -1.75
RORAP35398 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.1□□□□□ -1.75
RORAP35398 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RORAP35398 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RORAP35398 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RORAP35398 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
RORAP35398 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
RORAP35398 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.09□□□□□ -1.75
RORAP35398 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RORAP35398 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
RORAP35398 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RORAP35398 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RORAP35398 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
RORAP35398 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RORAP35398 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RORAP35398 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RORAP35398 RNA5SP52-201ENST00000362448 134 ntBASIC4.09□□□□□ -1.75
RORAP35398 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RORAP35398 SNORA57.1-201ENST00000391227 145 ntBASIC4.09□□□□□ -1.75
RORAP35398 AL022722.2-201ENST00000402519 180 ntBASIC4.09□□□□□ -1.75
RORAP35398 AL035696.2-201ENST00000407941 709 ntBASIC4.09□□□□□ -1.75
RORAP35398 MFSD13B-201ENST00000420133 1290 ntBASIC4.09□□□□□ -1.75
RORAP35398 COX6CP15-201ENST00000426313 211 ntBASIC4.09□□□□□ -1.75
RORAP35398 NANOGP6-201ENST00000429190 847 ntBASIC4.09□□□□□ -1.75
RORAP35398 FTH1P6-201ENST00000430768 320 ntBASIC4.09□□□□□ -1.75
RORAP35398 OR4C10P-201ENST00000434991 931 ntBASIC4.09□□□□□ -1.75
RORAP35398 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.09□□□□□ -1.75
RORAP35398 AP000926.1-201ENST00000479573 241 ntBASIC4.09□□□□□ -1.75
RORAP35398 AC090013.1-201ENST00000485147 480 ntBASIC4.09□□□□□ -1.75
RORAP35398 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.09□□□□□ -1.75
RORAP35398 AC010374.1-201ENST00000503762 1237 ntBASIC4.09□□□□□ -1.75
RORAP35398 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.09□□□□□ -1.75
RORAP35398 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.09□□□□□ -1.75
RORAP35398 AL592156.1-201ENST00000508758 304 ntBASIC4.09□□□□□ -1.75
RORAP35398 RNA5SP73-201ENST00000516744 108 ntBASIC4.09□□□□□ -1.75
RORAP35398 AC084824.1-201ENST00000550917 1005 ntBASIC4.09□□□□□ -1.75
RORAP35398 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.09□□□□□ -1.75
RORAP35398 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.09□□□□□ -1.75
RORAP35398 AC092868.3-201ENST00000560515 784 ntBASIC4.09□□□□□ -1.75
RORAP35398 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.09□□□□□ -1.75
RORAP35398 AL161729.3-201ENST00000603533 673 ntBASIC4.09□□□□□ -1.75
RORAP35398 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.09□□□□□ -1.75
RORAP35398 Z98200.1-201ENST00000607298 470 ntBASIC4.09□□□□□ -1.75
RORAP35398 FAM27D1-201ENST00000612308 341 ntBASIC4.09□□□□□ -1.75
RORAP35398 AC004825.2-201ENST00000616634 455 ntBASIC4.09□□□□□ -1.75
RORAP35398 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.09□□□□□ -1.75
RORAP35398 AC103858.2-201ENST00000621471 543 ntBASIC4.09□□□□□ -1.75
RORAP35398 AL445363.3-201ENST00000623080 671 ntBASIC4.09□□□□□ -1.75
RORAP35398 RNA5SP196-201ENST00000625967 102 ntBASIC4.09□□□□□ -1.75
RORAP35398 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.09□□□□□ -1.75
RORAP35398 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.09□□□□□ -1.75
RORAP35398 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.09□□□□□ -1.75
RORAP35398 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.09□□□□□ -1.75
RORAP35398 AC119674.1-212ENST00000641155 993 ntBASIC4.09□□□□□ -1.75
RORAP35398 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RORAP35398 AC096656.1-201ENST00000623826 1364 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms