Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.59□□□□□ -1.51
SMARCA1P28370 AC131159.1-201ENST00000621854 213 ntBASIC5.59□□□□□ -1.51
SMARCA1P28370 AC067852.7-201ENST00000623270 535 ntBASIC5.59□□□□□ -1.51
SMARCA1P28370 MIR3974-201ENST00000637126 96 ntBASIC5.59□□□□□ -1.51
SMARCA1P28370 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA1P28370 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SMARCA1P28370 AC073136.1-201ENST00000449426 2884 ntBASIC5.59□□□□□ -1.51
SMARCA1P28370 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SMARCA1P28370 AL034370.1-201ENST00000397254 1590 ntBASIC5.59□□□□□ -1.52
SMARCA1P28370 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SMARCA1P28370 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC005332.5-201ENST00000591222 2919 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SMARCA1P28370 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMARCA1P28370 RNU6-1339P-201ENST00000363574 91 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMARCA1P28370 RNU6-575P-201ENST00000411326 105 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 BX510359.2-201ENST00000417920 305 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 OR5AW1P-201ENST00000426334 1006 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA1P28370 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.58□□□□□ -1.52
SMARCA1P28370 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC073143.1-201ENST00000436316 395 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AL772161.1-201ENST00000439130 476 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 GTF3AP5-201ENST00000442645 697 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.58□□□□□ -1.52
SMARCA1P28370 RNU1-6P-201ENST00000516290 144 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC087373.1-201ENST00000524920 491 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 MTND2P26-201ENST00000528255 1029 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC135279.1-201ENST00000543493 504 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AL442163.2-201ENST00000553912 710 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AC044913.1-201ENST00000557200 430 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC091042.1-201ENST00000579213 173 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC010620.1-201ENST00000601088 1102 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AL109653.1-201ENST00000603091 248 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AL133507.1-201ENST00000605269 557 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AP000238.1-201ENST00000608759 426 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AL450489.1-201ENST00000612071 468 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AL592148.2-201ENST00000612210 372 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC091953.3-201ENST00000623220 236 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AP001784.1-201ENST00000624107 428 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA1P28370 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC068137.4-201ENST00000638485 296 ntBASIC5.58□□□□□ -1.52
SMARCA1P28370 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA1P28370 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SMARCA1P28370 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA1P28370 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.58□□□□□ -1.52
SMARCA1P28370 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMARCA1P28370 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMARCA1P28370 DDX18P5-201ENST00000534547 1306 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SMARCA1P28370 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMARCA1P28370 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SMARCA1P28370 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMARCA1P28370 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.57□□□□□ -1.52
SMARCA1P28370 MIR525-201ENST00000384978 85 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 AL590290.1-201ENST00000405336 380 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.57□□□□□ -1.52
SMARCA1P28370 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.57□□□□□ -1.52
SMARCA1P28370 AP001324.1-201ENST00000428553 399 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.57□□□□□ -1.52
SMARCA1P28370 AC006466.1-201ENST00000438721 289 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMARCA1P28370 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.57□□□□□ -1.52
SMARCA1P28370 AC007327.1-201ENST00000447461 264 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 OR1H1P-201ENST00000448731 937 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 AL133217.1-201ENST00000450980 425 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.57□□□□□ -1.52
SMARCA1P28370 AC011005.3-201ENST00000491624 395 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.57□□□□□ -1.52
SMARCA1P28370 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.57□□□□□ -1.52
SMARCA1P28370 AC118282.2-201ENST00000508739 374 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.57□□□□□ -1.52
SMARCA1P28370 MRPS33P3-201ENST00000513456 322 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 FABP5P12-201ENST00000515543 389 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 RNU6-1129P-201ENST00000515964 104 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 RNU6-347P-201ENST00000516658 105 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 AP006245.2-201ENST00000522004 300 ntBASIC5.57□□□□□ -1.52
SMARCA1P28370 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.57□□□□□ -1.52
SMARCA1P28370 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.57□□□□□ -1.52
SMARCA1P28370 AADACP1-206ENST00000561502 1193 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms