Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 IGKV2D-19-201ENST00000523346 262 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGA1P17096 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.91□□□□□ -1.78
HMGA1P17096 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.91□□□□□ -1.78
HMGA1P17096 MRPS35P3-201ENST00000603189 709 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HMGA1P17096 AC138627.1-204ENST00000641894 765 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
HMGA1P17096 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HMGA1P17096 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
HMGA1P17096 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.9□□□□□ -1.78
HMGA1P17096 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGA1P17096 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HMGA1P17096 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HMGA1P17096 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
HMGA1P17096 AC005261.2-201ENST00000593427 4258 ntBASIC3.9□□□□□ -1.78
HMGA1P17096 MIR7-3-201ENST00000384898 110 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HMGA1P17096 CRYBB2P1-203ENST00000415709 538 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGA1P17096 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGA1P17096 ATP5HP2-201ENST00000433885 485 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 CYCSP43-201ENST00000438233 310 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGA1P17096 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGA1P17096 RPS3AP46-201ENST00000448352 682 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGA1P17096 AC005726.1-201ENST00000494679 427 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGA1P17096 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGA1P17096 RN7SKP18-201ENST00000516005 275 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 SOD1P3-201ENST00000518682 454 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGA1P17096 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HMGA1P17096 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGA1P17096 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.9□□□□□ -1.79
HMGA1P17096 AP000619.3-201ENST00000535634 1127 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGA1P17096 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 SULT1C2P2-201ENST00000562517 294 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 AL390816.3-201ENST00000604527 1066 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 AC015813.4-201ENST00000610469 179 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 MIR4727-201ENST00000622232 55 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 DDX18P6-201ENST00000450119 1997 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGA1P17096 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HMGA1P17096 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HMGA1P17096 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.9□□□□□ -1.79
HMGA1P17096 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGA1P17096 MFSD8-236ENST00000641509 4050 ntBASIC3.9□□□□□ -1.79
HMGA1P17096 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGA1P17096 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGA1P17096 AC020633.1-201ENST00000468439 2247 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 RHOT1P2-201ENST00000366423 333 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 RNA5SP424-201ENST00000390988 115 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 RNA5SP104-201ENST00000410989 118 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 RNA5SP306-201ENST00000411087 107 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 AC096644.3-201ENST00000416788 338 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 AC068533.1-201ENST00000418542 415 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGA1P17096 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.89□□□□□ -1.79
HMGA1P17096 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGA1P17096 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGA1P17096 ASNSP4-201ENST00000511103 447 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGA1P17096 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGA1P17096 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.89□□□□□ -1.79
HMGA1P17096 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGA1P17096 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
HMGA1P17096 AL391261.4-201ENST00000616012 481 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 AC016957.2-201ENST00000616998 848 ntBASIC3.89□□□□□ -1.79
HMGA1P17096 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HMGA1P17096 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGA1P17096 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGA1P17096 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HMGA1P17096 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HMGA1P17096 AC027290.2-201ENST00000623210 18662 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGA1P17096 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGA1P17096 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.88□□□□□ -1.79
HMGA1P17096 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HMGA1P17096 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGA1P17096 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGA1P17096 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms