Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL2A1P02458 AC021242.1-201ENST00000507315 2035 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL2A1P02458 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.67□□□□□ -1.66
COL2A1P02458 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL2A1P02458 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.67□□□□□ -1.66
COL2A1P02458 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL2A1P02458 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL2A1P02458 TCP1P3-201ENST00000414406 1498 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL2A1P02458 AC024560.2-201ENST00000507981 1497 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL2A1P02458 AC126323.6-202ENST00000568092 3511 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL2A1P02458 RNA5SP97-201ENST00000365006 84 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL2A1P02458 HIGD1AP4-201ENST00000430194 280 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL2A1P02458 AL590762.3-201ENST00000436372 640 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.67□□□□□ -1.66
COL2A1P02458 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.67□□□□□ -1.66
COL2A1P02458 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.67□□□□□ -1.66
COL2A1P02458 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.67□□□□□ -1.66
COL2A1P02458 AC010460.2-201ENST00000509054 677 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 BTG4P1-201ENST00000510421 183 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL2A1P02458 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.67□□□□□ -1.66
COL2A1P02458 GTF2IP22-201ENST00000554443 182 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 AC037471.2-201ENST00000564941 598 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 AL049634.3-201ENST00000604968 457 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 AC016911.1-201ENST00000613297 452 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.67□□□□□ -1.66
COL2A1P02458 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.67□□□□□ -1.66
COL2A1P02458 LINC00561-201ENST00000565815 2738 ntBASIC4.67□□□□□ -1.66
COL2A1P02458 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
COL2A1P02458 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.67□□□□□ -1.66
COL2A1P02458 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
COL2A1P02458 MARK2P15-201ENST00000432204 2186 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
COL2A1P02458 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL2A1P02458 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.66□□□□□ -1.66
COL2A1P02458 RNU6-167P-201ENST00000384292 106 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 AC007066.1-201ENST00000392902 381 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 MTATP6P31-201ENST00000406985 692 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 AL355143.1-201ENST00000407101 841 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.66□□□□□ -1.66
COL2A1P02458 MTND4P11-201ENST00000417020 1058 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.66□□□□□ -1.66
COL2A1P02458 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.66□□□□□ -1.66
COL2A1P02458 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.66□□□□□ -1.66
COL2A1P02458 AL354692.1-201ENST00000423044 315 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.66□□□□□ -1.66
COL2A1P02458 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.66□□□□□ -1.66
COL2A1P02458 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.66□□□□□ -1.66
COL2A1P02458 AC104978.1-201ENST00000449387 391 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.66□□□□□ -1.66
COL2A1P02458 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.66□□□□□ -1.66
COL2A1P02458 AC111000.5-201ENST00000506559 1178 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.66□□□□□ -1.66
COL2A1P02458 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.66□□□□□ -1.66
COL2A1P02458 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.66□□□□□ -1.66
COL2A1P02458 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.66□□□□□ -1.66
COL2A1P02458 AC106782.4-201ENST00000568264 210 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.66□□□□□ -1.66
COL2A1P02458 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.66□□□□□ -1.66
COL2A1P02458 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.66□□□□□ -1.66
COL2A1P02458 AC110792.4-201ENST00000609843 298 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 AC097478.2-201ENST00000610572 514 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.66□□□□□ -1.66
COL2A1P02458 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.66□□□□□ -1.66
COL2A1P02458 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.66□□□□□ -1.66
COL2A1P02458 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL2A1P02458 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL2A1P02458 AL049781.1-201ENST00000623195 3585 ntBASIC4.66□□□□□ -1.66
COL2A1P02458 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.66
COL2A1P02458 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL2A1P02458 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL2A1P02458 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.65□□□□□ -1.66
COL2A1P02458 AC083799.1-201ENST00000366451 910 ntBASIC4.65□□□□□ -1.66
COL2A1P02458 SNORA5A-201ENST00000384111 134 ntBASIC4.65□□□□□ -1.66
COL2A1P02458 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.65□□□□□ -1.66
COL2A1P02458 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.65□□□□□ -1.66
COL2A1P02458 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.65□□□□□ -1.66
COL2A1P02458 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.65□□□□□ -1.66
COL2A1P02458 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.65□□□□□ -1.66
COL2A1P02458 RPL12P18-201ENST00000437175 325 ntBASIC4.65□□□□□ -1.66
COL2A1P02458 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.65□□□□□ -1.66
COL2A1P02458 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.65□□□□□ -1.66
COL2A1P02458 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL2A1P02458 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL2A1P02458 IGLV3-26-201ENST00000520756 302 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms