Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 OR2L1P-202ENST00000641567 1023 ntBASIC4.26□□□□□ -1.73
PRKNO60260 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PRKNO60260 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PRKNO60260 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PRKNO60260 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.26□□□□□ -1.73
PRKNO60260 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PRKNO60260 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.26□□□□□ -1.73
PRKNO60260 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PRKNO60260 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.26□□□□□ -1.73
PRKNO60260 AL359922.3-201ENST00000624779 1670 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
PRKNO60260 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRKNO60260 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 AL137100.1-201ENST00000556703 1620 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.25□□□□□ -1.73
PRKNO60260 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRKNO60260 AC126755.2-208ENST00000327792 462 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AC138969.1-213ENST00000331436 462 ntBASIC4.25□□□□□ -1.73
PRKNO60260 SNORA71.2-201ENST00000364941 134 ntBASIC4.25□□□□□ -1.73
PRKNO60260 RNU6-636P-201ENST00000384598 107 ntBASIC4.25□□□□□ -1.73
PRKNO60260 MIR129-1-201ENST00000384972 72 ntBASIC4.25□□□□□ -1.73
PRKNO60260 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRKNO60260 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.25□□□□□ -1.73
PRKNO60260 MTCO2P31-201ENST00000402702 684 ntBASIC4.25□□□□□ -1.73
PRKNO60260 RPS4XP9-201ENST00000405151 780 ntBASIC4.25□□□□□ -1.73
PRKNO60260 RPS7P9-201ENST00000414704 586 ntBASIC4.25□□□□□ -1.73
PRKNO60260 TCEA1P4-201ENST00000415066 844 ntBASIC4.25□□□□□ -1.73
PRKNO60260 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.25□□□□□ -1.73
PRKNO60260 GTF2IP2-201ENST00000424290 697 ntBASIC4.25□□□□□ -1.73
PRKNO60260 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 C1DP1-201ENST00000426049 402 ntBASIC4.25□□□□□ -1.73
PRKNO60260 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.25□□□□□ -1.73
PRKNO60260 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.25□□□□□ -1.73
PRKNO60260 AL592437.1-201ENST00000443781 492 ntBASIC4.25□□□□□ -1.73
PRKNO60260 ARL5AP2-201ENST00000444698 533 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AL589880.1-201ENST00000448271 287 ntBASIC4.25□□□□□ -1.73
PRKNO60260 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.25□□□□□ -1.73
PRKNO60260 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.25□□□□□ -1.73
PRKNO60260 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.25□□□□□ -1.73
PRKNO60260 AC009220.1-201ENST00000451614 275 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 snoU13.1-201ENST00000459157 104 ntBASIC4.25□□□□□ -1.73
PRKNO60260 RPL21P126-201ENST00000470049 478 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 AC104687.1-201ENST00000485829 412 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AC069304.1-201ENST00000491593 704 ntBASIC4.25□□□□□ -1.73
PRKNO60260 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRKNO60260 AC098799.3-201ENST00000506095 438 ntBASIC4.25□□□□□ -1.73
PRKNO60260 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
PRKNO60260 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 AP001636.2-201ENST00000525517 696 ntBASIC4.25□□□□□ -1.73
PRKNO60260 GSTP1P1-201ENST00000548078 319 ntBASIC4.25□□□□□ -1.73
PRKNO60260 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.25□□□□□ -1.73
PRKNO60260 AC027104.1-201ENST00000563702 681 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AC084783.1-201ENST00000565846 910 ntBASIC4.25□□□□□ -1.73
PRKNO60260 A2MP1-204ENST00000566278 4130 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AC095057.3-201ENST00000567102 1157 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.25□□□□□ -1.73
PRKNO60260 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.25□□□□□ -1.73
PRKNO60260 AL121895.2-201ENST00000619558 447 ntBASIC4.25□□□□□ -1.73
PRKNO60260 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.25□□□□□ -1.73
PRKNO60260 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.25□□□□□ -1.73
PRKNO60260 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PRKNO60260 AC090897.3-201ENST00000636973 1157 ntBASIC4.25□□□□□ -1.73
PRKNO60260 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.25□□□□□ -1.73
PRKNO60260 AC107027.3-201ENST00000565095 3473 ntBASIC4.25□□□□□ -1.73
PRKNO60260 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.25□□□□□ -1.73
PRKNO60260 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRKNO60260 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRKNO60260 DHX9P1-201ENST00000436565 3076 ntBASIC4.25□□□□□ -1.73
PRKNO60260 SEC63P2-201ENST00000503863 1939 ntBASIC4.25□□□□□ -1.73
PRKNO60260 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRKNO60260 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKNO60260 AC126323.6-202ENST00000568092 3511 ntBASIC4.24□□□□□ -1.73
PRKNO60260 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 ENSAP3-201ENST00000312710 333 ntBASIC4.24□□□□□ -1.73
PRKNO60260 RNU6-353P-201ENST00000364266 108 ntBASIC4.24□□□□□ -1.73
PRKNO60260 RNU4-28P-201ENST00000364739 141 ntBASIC4.24□□□□□ -1.73
PRKNO60260 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PRKNO60260 U3.22-201ENST00000391120 215 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms