Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM38O00635 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM38O00635 AL450345.1-202ENST00000605741 3881 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM38O00635 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM38O00635 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 CASC19-221ENST00000641309 1382 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM38O00635 THAP12P4-201ENST00000528321 2266 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM38O00635 AC104260.2-201ENST00000623551 3497 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
TRIM38O00635 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM38O00635 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM38O00635 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM38O00635 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM38O00635 AL034370.1-201ENST00000397254 1590 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRIM38O00635 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM38O00635 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM38O00635 CYB5AP4-201ENST00000396692 399 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM38O00635 SETP15-201ENST00000412724 337 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 GJA6P-201ENST00000415117 1042 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 RPL26P29-201ENST00000415623 438 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 EI24P4-201ENST00000423683 1078 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM38O00635 AC124944.2-201ENST00000429866 1242 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM38O00635 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM38O00635 AC073648.4-201ENST00000442655 781 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM38O00635 AC239809.1-201ENST00000450470 217 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 EIF4A1P11-201ENST00000451239 222 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM38O00635 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM38O00635 RPS29P22-201ENST00000472363 168 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 IGLV2-34-201ENST00000490007 283 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC022133.1-201ENST00000490961 571 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 RN7SL591P-201ENST00000496150 292 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC107401.1-201ENST00000503426 685 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM38O00635 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM38O00635 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM38O00635 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM38O00635 TCP11X3P-202ENST00000514289 1254 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 SMARCE1P4-201ENST00000523647 241 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM38O00635 PCNPP1-201ENST00000552501 511 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM38O00635 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM38O00635 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM38O00635 MTND3P13-201ENST00000574391 343 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 DPRXP4-201ENST00000578053 568 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM38O00635 MIR5708-201ENST00000579723 85 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 VN1R83P-201ENST00000595685 445 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC021749.1-201ENST00000604322 607 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC005084.1-201ENST00000605160 304 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC016877.3-201ENST00000606778 504 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC092354.2-201ENST00000607786 514 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AL445423.1-201ENST00000609941 536 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC021755.4-201ENST00000616620 456 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC091304.6-201ENST00000619761 202 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AC015908.5-201ENST00000623289 343 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AP000648.2-201ENST00000624182 404 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 AP003072.4-201ENST00000624580 310 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRIM38O00635 ZNF663P-202ENST00000641770 1131 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM38O00635 AL731566.1-201ENST00000620490 1937 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
TRIM38O00635 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM38O00635 AC005261.4-201ENST00000600047 1385 ntBASIC5.14□□□□□ -1.59
TRIM38O00635 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM38O00635 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 AC092747.4-201ENST00000620519 1861 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 SOCS5P3-201ENST00000425115 1576 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM38O00635 HMGB1P5-201ENST00000255320 642 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 U3.3-201ENST00000362986 216 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 RNU6-636P-201ENST00000384598 107 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 RNU6-1151P-201ENST00000384684 107 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms