Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RN7SL600P-201ENST00000581811 299 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 RNU4-89P-201ENST00000607443 133 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AC023043.4-201ENST00000612081 449 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SDCBPO00560 AL645927.2-201ENST00000618350 349 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AC090506.2-201ENST00000624521 419 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AC244205.2-202ENST00000635781 342 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SDCBPO00560 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.28□□□□□ -1.88
SDCBPO00560 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.28□□□□□ -1.88
SDCBPO00560 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.28□□□□□ -1.88
SDCBPO00560 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
SDCBPO00560 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.28□□□□□ -1.88
SDCBPO00560 AP002001.2-201ENST00000529025 1469 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
SDCBPO00560 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SDCBPO00560 CUL4AP1-201ENST00000514750 1863 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SDCBPO00560 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.27□□□□□ -1.89
SDCBPO00560 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SDCBPO00560 RPS26P8-201ENST00000393490 348 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.27□□□□□ -1.89
SDCBPO00560 AL807761.1-201ENST00000417622 171 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.27□□□□□ -1.89
SDCBPO00560 AC016712.1-201ENST00000431088 378 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 HMGB3P10-201ENST00000434734 572 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.27□□□□□ -1.89
SDCBPO00560 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.27□□□□□ -1.89
SDCBPO00560 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.27□□□□□ -1.89
SDCBPO00560 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.27□□□□□ -1.89
SDCBPO00560 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.27□□□□□ -1.89
SDCBPO00560 RPS11P1-201ENST00000451072 473 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 MTCO3P16-201ENST00000454456 754 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 MTND6P32-201ENST00000457611 483 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 AC010618.1-201ENST00000469924 477 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 NDUFA5P9-201ENST00000472609 340 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 TRBV8-1-201ENST00000481590 279 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 AC110792.1-201ENST00000491826 472 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.27□□□□□ -1.89
SDCBPO00560 RN7SKP83-201ENST00000516512 178 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SDCBPO00560 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.27□□□□□ -1.89
SDCBPO00560 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.27□□□□□ -1.89
SDCBPO00560 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.27□□□□□ -1.89
SDCBPO00560 AC135001.1-201ENST00000544546 283 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 AC090877.1-201ENST00000561418 344 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.27□□□□□ -1.89
SDCBPO00560 AC069366.1-201ENST00000583159 838 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.27□□□□□ -1.89
SDCBPO00560 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.27□□□□□ -1.89
SDCBPO00560 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.27□□□□□ -1.89
SDCBPO00560 AC110741.2-201ENST00000605278 268 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 AL023583.1-201ENST00000607518 1143 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 ATE1-AS1-202ENST00000636460 506 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 AC090971.4-201ENST00000560291 1800 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 PNPT1P2-201ENST00000456768 2050 ntBASIC3.27□□□□□ -1.89
SDCBPO00560 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SDCBPO00560 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.27□□□□□ -1.89
SDCBPO00560 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.27□□□□□ -1.89
SDCBPO00560 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 AC106871.1-201ENST00000568324 3102 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 CASC19-261ENST00000641853 1638 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 HSPA8P1-201ENST00000425843 1833 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
SDCBPO00560 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SDCBPO00560 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
SDCBPO00560 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 MIR423-201ENST00000362201 94 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 RNA5SP130-201ENST00000364431 114 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 AL022722.2-201ENST00000402519 180 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 MIR1183-201ENST00000408856 89 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 RNU4-6P-201ENST00000410804 122 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 RHEBP3-201ENST00000411920 351 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.26□□□□□ -1.89
SDCBPO00560 AC093698.1-201ENST00000423843 571 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 RPS6P12-201ENST00000432491 726 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.26□□□□□ -1.89
SDCBPO00560 AC083863.1-201ENST00000438811 231 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.26□□□□□ -1.89
SDCBPO00560 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.26□□□□□ -1.89
SDCBPO00560 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.26□□□□□ -1.89
SDCBPO00560 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.26□□□□□ -1.89
SDCBPO00560 RPL7AP52-201ENST00000458096 790 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.26□□□□□ -1.89
SDCBPO00560 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.26□□□□□ -1.89
SDCBPO00560 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.26□□□□□ -1.89
SDCBPO00560 AC092747.2-201ENST00000545069 983 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.26□□□□□ -1.89
SDCBPO00560 SNORD39.2-201ENST00000579995 76 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.26□□□□□ -1.89
SDCBPO00560 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.26□□□□□ -1.89
SDCBPO00560 AL390816.3-201ENST00000604527 1066 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms