Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 IFNNP1-201ENST00000429219 553 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 RPL19P16-201ENST00000433839 588 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 RPL5P25-201ENST00000441148 775 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC023512.1-201ENST00000444513 499 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC007327.1-201ENST00000447461 264 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AL354710.1-201ENST00000453641 246 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC092324.1-201ENST00000468671 324 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 RPL21P6-201ENST00000479171 504 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC010350.1-201ENST00000504908 231 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC010198.2-201ENST00000550612 259 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC090616.2-202ENST00000584248 222 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC106791.2-201ENST00000604680 391 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC018618.2-201ENST00000604770 446 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC103591.3-201ENST00000608684 209 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC104073.3-201ENST00000610942 955 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC139769.3-201ENST00000618383 175 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 AC111188.2-201ENST00000529697 1387 ntBASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 AC090017.1-201ENST00000548612 1779 ntBASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 IRF5P1-201ENST00000504852 2164 ntBASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 AC006206.1-201ENST00000544842 3387 ntBASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CTDP1Q9Y5B0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 ADAM24P-201ENST00000398655 2101 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 RNA5SP453-201ENST00000362503 119 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 SNORA5.1-201ENST00000384275 131 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 OR6C64P-201ENST00000419708 825 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 MTND1P32-201ENST00000433043 938 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 RPL34P20-201ENST00000442771 351 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL354714.3-201ENST00000447284 493 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 NOP56P2-201ENST00000447491 769 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL050341.1-201ENST00000447743 313 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 RPL12P26-201ENST00000452430 487 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC113347.3-201ENST00000509113 148 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC107918.3-201ENST00000533272 382 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC008033.2-201ENST00000542626 177 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 NBEAP1-201ENST00000554452 979 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC105254.2-201ENST00000603636 436 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC087283.1-201ENST00000604029 1074 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL031320.1-201ENST00000604177 357 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL627230.1-201ENST00000613077 211 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL591926.8-201ENST00000616876 211 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL450345.1-202ENST00000605741 3881 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms