Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC093084.1-201ENST00000424233 687 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 NANOGP5-201ENST00000424456 877 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC005189.1-201ENST00000431286 310 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 NPM1P39-201ENST00000449818 867 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 RNA5SP103-201ENST00000459503 118 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC090013.1-201ENST00000485147 480 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC025459.1-201ENST00000504072 156 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 RNU6-513P-201ENST00000516104 104 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 RN7SKP287-201ENST00000516546 266 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 RNU6-1308P-201ENST00000516817 103 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 OR8K4P-201ENST00000534608 872 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 MTCYBP23-201ENST00000558717 1102 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 MTND3P12-201ENST00000559068 328 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC090888.2-201ENST00000559765 1144 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 RPL23AP97-201ENST00000568955 471 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 MIR4284-201ENST00000578924 81 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC093424.1-201ENST00000604999 338 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AL450336.1-201ENST00000605180 586 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC012557.1-201ENST00000607115 611 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 RNU4-5P-201ENST00000607255 135 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AL353726.1-201ENST00000614041 1000 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 BNIP3P41-202ENST00000616656 861 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC007546.2-201ENST00000623996 360 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AP001642.1-201ENST00000624727 2117 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 EIF2AP4-201ENST00000424793 1781 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 MT-TP-201ENST00000387461 68 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC097374.1-203ENST00000400783 485 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 RPS20P14-201ENST00000412545 360 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 SETP15-201ENST00000412724 337 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 VPS26BP1-201ENST00000417155 755 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 OR6C64P-201ENST00000419708 825 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 MTND2P5-201ENST00000432656 1006 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 RPL23AP52-201ENST00000439311 478 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC023512.1-201ENST00000444513 499 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 PHBP16-201ENST00000446318 950 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC008280.2-201ENST00000455473 307 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 ATP1B1P1-201ENST00000509767 915 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 SNORA31.13-201ENST00000516624 135 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 OR5BC1P-201ENST00000529327 739 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC113403.1-201ENST00000604910 193 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 Z98200.1-201ENST00000607298 470 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AL445423.1-201ENST00000609941 536 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 MIR6758-201ENST00000620653 63 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 MIR6810-201ENST00000622701 70 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.72□□□□□ -1.65
SIX4Q9UIU6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.72□□□□□ -1.65
SIX4Q9UIU6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.71□□□□□ -1.65
SIX4Q9UIU6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SIX4Q9UIU6 MAPK10-320ENST00000641462 6696 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms