Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 HSPA8P17-201ENST00000427029 1382 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AL512646.1-201ENST00000269395 1077 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AL390316.1-201ENST00000406279 553 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AL133264.1-201ENST00000407157 562 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC234782.4-201ENST00000417646 1048 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 IFNNP1-201ENST00000429219 553 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 RPL31P54-201ENST00000429803 370 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 KNOP1P3-201ENST00000446933 426 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 RPL7P59-201ENST00000447700 943 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC009127.1-201ENST00000467090 155 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC010307.1-201ENST00000467206 836 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 RPS27P23-201ENST00000487608 251 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC069304.1-201ENST00000491593 704 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 RPS6P4-201ENST00000494693 758 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 RNA5SP230-201ENST00000517039 122 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AP001207.1-201ENST00000524051 481 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC068993.1-201ENST00000546724 589 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AL390334.1-201ENST00000556395 450 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC051619.2-201ENST00000559063 397 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AL137072.1-201ENST00000603444 466 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC018695.5-201ENST00000605872 315 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC092653.1-201ENST00000608509 531 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC234782.5-201ENST00000617723 324 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC099494.2-201ENST00000623371 978 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC127502.3-201ENST00000636170 1206 ntBASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTHRC1Q96CG8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC022031.1-201ENST00000585985 2593 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC011447.7-201ENST00000624228 1590 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 RNU5D-1-201ENST00000363299 116 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 Y_RNA.194-201ENST00000363985 102 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 RNU6-920P-201ENST00000410926 92 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 CEACAMP8-201ENST00000413902 580 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 DYNLL1P7-201ENST00000429273 258 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC244035.1-201ENST00000430042 390 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 NPM1P33-201ENST00000438918 872 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC021660.1-201ENST00000465006 554 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC097484.1-201ENST00000471148 389 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 RPL21P6-201ENST00000479171 504 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms