Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL035079.1-201ENST00000405210 287 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 NPM1P11-201ENST00000417106 855 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC4Q92889 GTF2IP23-201ENST00000423746 351 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.84□□□□□ -1.47
ERCC4Q92889 OR5BE1P-201ENST00000425977 939 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 IFNNP1-201ENST00000429219 553 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 MTCO1P54-201ENST00000430139 712 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.84□□□□□ -1.47
ERCC4Q92889 USP9YP22-201ENST00000438971 294 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.84□□□□□ -1.47
ERCC4Q92889 RHEBP2-201ENST00000450289 600 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 TPMTP4-201ENST00000450749 678 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 USP9YP10-201ENST00000454868 628 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.84□□□□□ -1.47
ERCC4Q92889 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.84□□□□□ -1.47
ERCC4Q92889 RPL21P6-201ENST00000479171 504 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 RPS6P4-201ENST00000494693 758 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AL136038.1-201ENST00000497246 351 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
ERCC4Q92889 ARL4AP1-201ENST00000503220 705 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 HSPE1P23-201ENST00000509838 286 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 USP9YP5-201ENST00000511770 630 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC4Q92889 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC4Q92889 IGJP1-201ENST00000522682 475 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AC022880.1-201ENST00000534017 973 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AC015720.2-201ENST00000567709 334 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AC011260.1-201ENST00000578420 472 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 MIR548Y-201ENST00000582739 110 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AC008759.1-201ENST00000589783 983 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AF131215.7-201ENST00000602443 707 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AP001005.3-201ENST00000622049 129 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AC021106.3-201ENST00000623925 531 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AL691477.1-201ENST00000624398 162 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AP003072.4-201ENST00000624580 310 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.84□□□□□ -1.47
ERCC4Q92889 CYP4F35P-202ENST00000636121 390 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 OR5BE1P-202ENST00000641168 1176 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC4Q92889 AC000374.1-201ENST00000434698 1745 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC4Q92889 AL137100.1-201ENST00000556703 1620 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 AC093311.1-201ENST00000506586 2021 ntBASIC5.84□□□□□ -1.48
ERCC4Q92889 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
ERCC4Q92889 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.84□□□□□ -1.48
ERCC4Q92889 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.83□□□□□ -1.48
ERCC4Q92889 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC4Q92889 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC4Q92889 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC4Q92889 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC4Q92889 OR55B1P-203ENST00000641518 2602 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AL672167.1-204ENST00000641875 3017 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ERCC4Q92889 NEAT1-202ENST00000501122 22743 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AL606537.1-201ENST00000607258 2011 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC4Q92889 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.83□□□□□ -1.48
ERCC4Q92889 AL034374.1-201ENST00000406329 351 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC4Q92889 MTCO1P21-201ENST00000416634 589 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.83□□□□□ -1.48
ERCC4Q92889 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC019050.1-201ENST00000418508 492 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC4Q92889 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC4Q92889 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC4Q92889 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC4Q92889 BX842559.2-201ENST00000451418 605 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 RFC5P1-201ENST00000454419 874 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 RNA5SP103-201ENST00000459503 118 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC018638.3-201ENST00000461273 132 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.83□□□□□ -1.48
ERCC4Q92889 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.83□□□□□ -1.48
ERCC4Q92889 AC037198.2-201ENST00000478845 733 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 RPL7AP10-201ENST00000481016 791 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC4Q92889 AC107401.1-201ENST00000503426 685 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC4Q92889 AC147055.4-201ENST00000504399 745 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC010424.1-201ENST00000506336 297 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC008885.2-201ENST00000509506 930 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC011411.1-201ENST00000509592 876 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC4Q92889 AP006245.2-201ENST00000522004 300 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ERCC4Q92889 HIGD1AP10-201ENST00000527837 282 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AP001317.1-201ENST00000531194 960 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms