Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS8Q8N3P4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS8Q8N3P4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS8Q8N3P4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VPS8Q8N3P4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 CYCSP4-201ENST00000429682 331 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 RPL37P1-201ENST00000432310 284 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 RPS3AP46-201ENST00000448352 682 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AC006480.1-201ENST00000449887 378 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 snoU13.22-201ENST00000459428 104 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 RPL7P15-201ENST00000461190 712 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 RPL23AP12-201ENST00000467573 473 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AC005726.1-201ENST00000494679 427 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AC020914.6-201ENST00000594327 272 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AC091905.1-201ENST00000624400 311 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AC010300.1-201ENST00000600671 5134 ntBASIC5.84□□□□□ -1.47
VPS8Q8N3P4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
VPS8Q8N3P4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 RPL6P5-201ENST00000445678 828 ntBASIC5.83□□□□□ -1.48
VPS8Q8N3P4 AL358232.1-201ENST00000448030 501 ntBASIC5.83□□□□□ -1.48
VPS8Q8N3P4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 IGKV2D-19-201ENST00000523346 262 ntBASIC5.83□□□□□ -1.48
VPS8Q8N3P4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 SNORA51-201ENST00000606420 132 ntBASIC5.83□□□□□ -1.48
VPS8Q8N3P4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 AC093535.2-201ENST00000624769 2326 ntBASIC5.83□□□□□ -1.48
VPS8Q8N3P4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS8Q8N3P4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 MIR208A-201ENST00000362287 71 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 RPL21P109-201ENST00000422213 475 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 HIGD1AP12-201ENST00000427832 281 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 NDUFB1P1-201ENST00000435191 180 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AF228730.2-201ENST00000438784 848 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AL645931.1-201ENST00000439737 410 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 BTF3L4P4-201ENST00000506381 449 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 PAICSP4-201ENST00000517543 1253 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 HMGB1P19-201ENST00000517578 577 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 SUMO2P20-201ENST00000520803 283 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 BNIP3P22-201ENST00000593399 556 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC009237.17-201ENST00000618111 748 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC106871.1-201ENST00000568324 3102 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC007823.1-201ENST00000569932 1566 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 SNORA70.4-201ENST00000365509 134 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 MIR670-201ENST00000390142 98 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 NPM1P38-201ENST00000403835 865 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 LINC01881-201ENST00000416103 412 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC104619.4-201ENST00000510773 249 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AL133457.1-201ENST00000564251 987 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 AC009093.8-201ENST00000641769 292 ntBASIC5.82□□□□□ -1.48
VPS8Q8N3P4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS8Q8N3P4 USP8P1-201ENST00000494673 3183 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms