Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 RN7SKP235-201ENST00000410662 305 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 FAR2P2-201ENST00000413041 594 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 MFSD13B-201ENST00000420133 1290 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC007394.1-201ENST00000421941 531 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AL356387.2-201ENST00000422272 243 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AL590762.4-201ENST00000425885 253 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 USP12PY-201ENST00000427677 1064 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 ATP5HP2-201ENST00000433885 485 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC096638.2-201ENST00000434965 711 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AL772161.1-201ENST00000439130 476 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 RSL24D1P2-201ENST00000445584 366 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 ARL2BPP10-201ENST00000446487 531 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC239809.1-201ENST00000450470 217 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 RPL36AP13-201ENST00000457490 317 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AL592156.1-201ENST00000508758 304 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 IGHV3-32-201ENST00000519182 355 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC012417.1-201ENST00000582307 1039 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AL391834.1-201ENST00000609609 560 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 MIR486-1-201ENST00000612171 68 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC016957.2-201ENST00000616998 848 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 MAPK10-373ENST00000641983 6772 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AL592148.3-201ENST00000608771 2646 ntBASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC007529.1-201ENST00000418574 2178 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 ERCC6-202ENST00000374127 1782 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 OR4K15-201ENST00000305051 1216 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 RNU1-14P-201ENST00000362759 152 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 RNA5SP322-201ENST00000363617 119 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC083799.1-201ENST00000366451 910 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 RNA5SP87-201ENST00000384155 118 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC245517.2-201ENST00000442890 346 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 PHBP16-201ENST00000446318 950 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC109327.1-201ENST00000471666 403 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC010342.1-201ENST00000514047 877 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 NPM1P47-201ENST00000560843 856 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC135803.1-201ENST00000608748 565 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 OR56B2P-202ENST00000641377 2453 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 AC022893.2-201ENST00000564832 3296 ntBASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUDCD3Q8IVD9 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 DHX40P1-201ENST00000588725 1412 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 RPL23AP59-201ENST00000399415 461 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 RNA5SP239-201ENST00000410218 129 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AL445528.1-201ENST00000426330 420 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 BRWD1P3-201ENST00000428816 390 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 RPL23AP46-201ENST00000438548 490 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 EXTL2P1-201ENST00000446218 416 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 RN7SL354P-201ENST00000469282 294 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AP000926.1-201ENST00000479573 241 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms